RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 NPY5RQ15761 445 aa12.54□□□□□ -0.4
COPS4-206ENST00000509093 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
COPS4-206ENST00000509093 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
COPS4-206ENST00000509093 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
COPS4-206ENST00000509093 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
COPS4-206ENST00000509093 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
COPS4-206ENST00000509093 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
COPS4-206ENST00000509093 KLRF2D3W0D1 207 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 TTLL1O95922 423 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 SYF2O95926 243 aaKnown RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 PDHBP11177 359 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 SCG2P13521 617 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 SEPT2Q15019 361 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 CT47A1Q5JQC4 288 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 ZNF569Q5MCW4 686 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 RESP18Q5W5W9 173 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 SAMD7Q7Z3H4 446 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 SIAH1Q8IUQ4 282 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 ELOA2Q8IYF1 753 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 NAPGQ99747 312 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 NOSTRINQ8IVI9 506 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
COPS4-206ENST00000509093 CCDC17Q96LX7 622 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 DACH1Q9UI36 760 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
COPS4-206ENST00000509093 MYH6P13533 1939 aa12.52□□□□□ -0.4
COPS4-206ENST00000509093 MYH8P13535 1937 aa12.52□□□□□ -0.4
COPS4-206ENST00000509093 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
COPS4-206ENST00000509093 BMP6P22004 513 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 ZNF280AP59817 542 aaPredicted RBP12.52□□□□□ -0.41
COPS4-206ENST00000509093 MAP9Q49MG5 647 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 SLC35F6Q8N357 371 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 KAT2BQ92831 832 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.41
COPS4-206ENST00000509093 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 GPCPD1Q9NPB8 672 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 DONSONQ9NYP3 566 aa12.52□□□□□ -0.41
COPS4-206ENST00000509093 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.41
COPS4-206ENST00000509093 KIF1CO43896 1103 aaKnown RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 MCM3P25205 808 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 MAP2K2P36507 400 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 GNAQP50148 359 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 NR1I3Q14994 352 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
COPS4-206ENST00000509093 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 MIGA2Q7L4E1 593 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 RPAINQ86UA6 219 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 PGAP2Q9UHJ9 254 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 CNOT7Q9UIV1 285 aaKnown RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 HPCAL4Q9UM19 191 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 GH2P01242 217 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 HSP90AA4PQ58FG1 418 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 IGSF22Q8N9C0 903 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 MYO1AQ9UBC5 1043 aa12.51□□□□□ -0.41
COPS4-206ENST00000509093 HOOK1Q9UJC3 728 aaKnown RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
COPS4-206ENST00000509093 A0A0U1RQJ8 604 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
COPS4-206ENST00000509093 PTPAQ15257 358 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
COPS4-206ENST00000509093 ATRIPQ8WXE1 791 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 MAN1B1Q9UKM7 699 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
COPS4-206ENST00000509093 UTRNP46939 3433 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 WNT7AO00755 349 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 RAD21O60216 631 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 XBP1P17861 261 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
COPS4-206ENST00000509093 HNRNPH1P31943 449 aaKnown RBP12.5□□□□□ -0.41
COPS4-206ENST00000509093 KRT2P35908 639 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 LIG3P49916 1009 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 NLRP5P59047 1200 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 AMPD2Q01433 879 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 KCTD1Q719H9 257 aa12.5□□□□□ -0.41
COPS4-206ENST00000509093 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms