RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 C9orf118A6NHY6 69 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 C6P13671 934 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 SMAD4Q13485 552 aaKnown RBP5.65□□□□□ -1.5
GYPB-209ENST00000508618 COL9A2Q14055 689 aaPredicted RBP5.65□□□□□ -1.5
GYPB-209ENST00000508618 SURF1Q15526 300 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 ZNF326Q5BKZ1 582 aaKnown RBP5.65□□□□□ -1.5
GYPB-209ENST00000508618 PRR31Q5SQ13 230 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 DDX11Q96FC9 970 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 RCC1LQ96I51 464 aaKnown RBP5.65□□□□□ -1.5
GYPB-209ENST00000508618 GULP1Q9UBP9 304 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 CGGBP1Q9UFW8 167 aaPredicted RBP5.65□□□□□ -1.5
GYPB-209ENST00000508618 INVSQ9Y283 1065 aa5.65□□□□□ -1.5
GYPB-209ENST00000508618 CYR61O00622 381 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 PAMP19021 973 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 AMPD2Q01433 879 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 PPP2R5DQ14738 602 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 C9orf131Q5VYM1 1079 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 CRIP3Q6Q6R5 217 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 PLEKHH3Q7Z736 793 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 ZC3H18Q86VM9 953 aaKnown RBP5.64□□□□□ -1.51
GYPB-209ENST00000508618 ARHGEF39Q8N4T4 335 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 TIMELESSQ9UNS1 1208 aa5.64□□□□□ -1.51
GYPB-209ENST00000508618 NPHP3-ACAD11A0A0J9YXS1 232 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 C2orf71A6NGG8 1288 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 NPHS1O60500 1241 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 PPP1R11O60927 126 aaPredicted RBP5.63□□□□□ -1.51
GYPB-209ENST00000508618 PPM1BO75688 479 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 GDF5P43026 501 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 SLC6A11P48066 632 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 CHST13Q8NET6 341 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 CDK5RAP1Q96SZ6 601 aaKnown RBP5.63□□□□□ -1.51
GYPB-209ENST00000508618 BCL2L13Q9BXK5 485 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 METTL5Q9NRN9 209 aaKnown RBP5.63□□□□□ -1.51
GYPB-209ENST00000508618 FAM86C1Q9NVL1 165 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 PPT2Q9UMR5 302 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 LTBP3Q9NS15 1303 aa5.63□□□□□ -1.51
GYPB-209ENST00000508618 C7orf72A4D263 438 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 FSHBP01225 129 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 NTRK1P04629 796 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 ACVRL1P37023 503 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 ITGA1P56199 1179 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 CDSNQ15517 529 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 LDLRAD1Q5T700 205 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 HEATR6Q6AI08 1181 aaKnown RBP5.62□□□□□ -1.51
GYPB-209ENST00000508618 GLB1LQ6UWU2 654 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 RUFY4Q6ZNE9 571 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 ADCY4Q8NFM4 1077 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 KISS1RQ969F8 398 aaPredicted RBP5.62□□□□□ -1.51
GYPB-209ENST00000508618 MMP19Q99542 508 aa5.62□□□□□ -1.51
GYPB-209ENST00000508618 NGRNQ9NPE2 291 aaKnown RBP5.62□□□□□ -1.51
GYPB-209ENST00000508618 LAMTOR5O43504 91 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 EPHX1P07099 455 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 ZNF28P17035 718 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 ZNF76P36508 570 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 CPNE8Q86YQ8 564 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 Q8N1Y9 231 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 TXNDC5Q8NBS9 432 aaKnown RBP5.61□□□□□ -1.51
GYPB-209ENST00000508618 OR6P1Q8NGX9 317 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 PLEKHO2Q8TD55 490 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 SEC14L1Q92503 715 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 COPS5Q92905 334 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 LCORQ96JN0 433 aaPredicted RBP5.61□□□□□ -1.51
GYPB-209ENST00000508618 SPATA32Q96LK8 384 aa5.61□□□□□ -1.51
GYPB-209ENST00000508618 SCAND2PQ9GZW5 306 aaPredicted RBP5.61□□□□□ -1.51
GYPB-209ENST00000508618 HMGA2P52926 109 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 SLC7A5Q01650 507 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 DPY19L1Q2PZI1 675 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 GNPTABQ3T906 1256 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 FBXW10Q5XX13 1052 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 PKN3Q6P5Z2 889 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 RIOX2Q8IUF8 465 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 Q8N1X5 172 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 DNERQ8NFT8 737 aa5.6□□□□□ -1.51
GYPB-209ENST00000508618 ZNF536O15090 1300 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 B4GALT3O60512 393 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 SLPIP03973 132 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 FUCA1P04066 466 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 FANCCQ00597 558 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 TMEM87AQ8NBN3 555 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
GYPB-209ENST00000508618 KLHL6Q8WZ60 621 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 CD248Q9HCU0 757 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 PPP4R1LQ9P1A2 415 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 ST6GALNAC2Q9UJ37 374 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 SIT1Q9Y3P8 196 aa5.59□□□□□ -1.51
GYPB-209ENST00000508618 OVOL3O00110 214 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 SGSM2O43147 1006 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 FZD7O75084 574 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 VAMP4O75379 141 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 SOX9P48436 509 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 EPHB4P54760 987 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 MBLAC2Q68D91 279 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 MCTP2Q6DN12 878 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 CD300LDQ6UXZ3 194 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 USP51Q70EK9 711 aa5.58□□□□□ -1.52
GYPB-209ENST00000508618 ADAT2Q7Z6V5 191 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms