RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 SOWAHBA6NEL2 793 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 SPDYE3A6NKU9 549 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 STAM2O75886 525 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 FOSP01100 380 aaPredicted RBP10.5□□□□□ -0.73
NUP54-207ENST00000508583 RARBP10826 455 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 GJA8P48165 433 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 ADCY7P51828 1080 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 SCRN1Q12765 414 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 TRIM32Q13049 653 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 ACVR2BQ13705 512 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 NTRK3Q16288 839 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 WWC2Q6AWC2 1192 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 MORC4Q8TE76 937 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 GTF3C6Q969F1 213 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 KIF2CQ99661 725 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 UNC93B1Q9H1C4 597 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 SPC25Q9HBM1 224 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 NCOA5Q9HCD5 579 aaKnown RBP10.5□□□□□ -0.73
NUP54-207ENST00000508583 C6orf50Q9HD87 102 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 DDX20Q9UHI6 824 aaKnown RBP10.5□□□□□ -0.73
NUP54-207ENST00000508583 ZHX1Q9UKY1 873 aaPredicted RBP10.5□□□□□ -0.73
NUP54-207ENST00000508583 FAM184BQ9ULE4 1060 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
NUP54-207ENST00000508583 hCG_1642624A0A1W2PR95 340 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 STXBP3O00186 592 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 SGPL1O95470 568 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 TFRCP02786 760 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 EDNRBP24530 442 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 CCND2P30279 289 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 AP3B2Q13367 1082 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 MTFR1Q15390 333 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 STXBP2Q15833 593 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 ME3Q16798 604 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 IFFO2Q5TF58 517 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 KCNV1Q6PIU1 500 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 NOL8Q76FK4 1167 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 U2AF1L4Q8WU68 220 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
NUP54-207ENST00000508583 PHKBQ93100 1093 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 FGD4Q96M96 766 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
NUP54-207ENST00000508583 RIC8AQ9NPQ8 531 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 PXMP2Q9NR77 195 aa10.49□□□□□ -0.73
NUP54-207ENST00000508583 LCTP09848 1927 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 OPLAHO14841 1288 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 NKRFO15226 690 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUP54-207ENST00000508583 SNAI1O95863 264 aaPredicted RBP10.48□□□□□ -0.73
NUP54-207ENST00000508583 CCND3P30281 292 aaPredicted RBP10.48□□□□□ -0.73
NUP54-207ENST00000508583 HOXA13P31271 388 aaPredicted RBP10.48□□□□□ -0.73
NUP54-207ENST00000508583 TRIM29Q14134 588 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 IQSEC1Q6DN90 963 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 ARRDC4Q8NCT1 418 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 ZMYND12Q9H0C1 365 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 BRMS1Q9HCU9 246 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 MCM3APO60318 1980 aa10.48□□□□□ -0.73
NUP54-207ENST00000508583 FRMPD3Q5JV73 1810 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 MEIS2O14770 477 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 DUSP11O75319 330 aaKnown RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 EIF3JO75822 258 aaKnown RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 NR3C2P08235 984 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 ZNF865P0CJ78 1059 aaPredicted RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 NLRP5P59047 1200 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 TTLL4Q14679 1199 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 PKN1Q16512 942 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 CCDC144BQ3MJ40 725 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 BRDTQ58F21 947 aaPredicted RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 RNF180Q86T96 592 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 REXO1Q8N1G1 1221 aaKnown RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 CDHR1Q96JP9 859 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 TAAR1Q96RJ0 339 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 PDCD2LQ9BRP1 358 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 ORC3Q9UBD5 711 aaPredicted RBP10.47□□□□□ -0.73
NUP54-207ENST00000508583 Q9Y3F1 56 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 FRMPD4Q14CM0 1322 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 LRRC37A2A6NM11 1700 aa10.47□□□□□ -0.73
NUP54-207ENST00000508583 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 ZEB2O60315 1214 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 TGFB3P10600 412 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 TNFAIP2Q03169 654 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 PGM5Q15124 567 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 USP17L6PQ6QN14 398 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 FBXO16Q8IX29 292 aaPredicted RBP10.46□□□□□ -0.73
NUP54-207ENST00000508583 NECAB1Q8N987 351 aa10.46□□□□□ -0.73
NUP54-207ENST00000508583 FAM184AQ8NB25 1140 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms