RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 ANKLE1Q8NAG6 615 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 GPKOWQ92917 476 aaPredicted RBP eCLIP17.26■□□□□ 0.35
RNF4-210ENST00000508235 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 SLC26A6Q9BXS9 759 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 COL20A1Q9P218 1284 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 OGDHLQ9ULD0 1010 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 LRRC37A2A6NM11 1700 aa17.26■□□□□ 0.35
RNF4-210ENST00000508235 HOXA13P31271 388 aaPredicted RBP17.25■□□□□ 0.35
RNF4-210ENST00000508235 SCRN1Q12765 414 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 STXBP2Q15833 593 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 LHX8Q68G74 356 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
RNF4-210ENST00000508235 FCHSD1Q86WN1 690 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 PHKBQ93100 1093 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
RNF4-210ENST00000508235 PXMP2Q9NR77 195 aa17.25■□□□□ 0.35
RNF4-210ENST00000508235 STXBP3O00186 592 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 DEXIO95424 95 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 RGS19P49795 217 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 ADCY7P51828 1080 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 CCDC144BQ3MJ40 725 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 FAM177A1Q8N128 213 aaPredicted RBP17.24■□□□□ 0.35
RNF4-210ENST00000508235 ARRDC4Q8NCT1 418 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 CCDC148Q8NFR7 591 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 KATNBL1Q9H079 304 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 SH3GLB2Q9NR46 395 aa17.24■□□□□ 0.35
RNF4-210ENST00000508235 KIAA1217Q5T5P2 1943 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 ESYT2A0FGR8 921 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 SMCO2A6NFE2 343 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 MEIS2O14770 477 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 DUSP11O75319 330 aaKnown RBP17.23■□□□□ 0.35
RNF4-210ENST00000508235 NR3C2P08235 984 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 EIF2AK2P19525 551 aaKnown RBP17.23■□□□□ 0.35
RNF4-210ENST00000508235 PKN1Q16512 942 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 ME3Q16798 604 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 IQSEC1Q6DN90 963 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 FBXO16Q8IX29 292 aaPredicted RBP17.23■□□□□ 0.35
RNF4-210ENST00000508235 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
RNF4-210ENST00000508235 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
RNF4-210ENST00000508235 FARP2O94887 1054 aaPredicted RBP17.22■□□□□ 0.35
RNF4-210ENST00000508235 GNA11P29992 359 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 TNFAIP2Q03169 654 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 PGM5Q15124 567 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 WASF1Q92558 559 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 PDCD2LQ9BRP1 358 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 SPC25Q9HBM1 224 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 XPNPEP3Q9NQH7 507 aa17.22■□□□□ 0.35
RNF4-210ENST00000508235 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
RNF4-210ENST00000508235 FRMPD4Q14CM0 1322 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 STAM2O75886 525 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 FOSP01100 380 aaPredicted RBP17.21■□□□□ 0.35
RNF4-210ENST00000508235 XBP1P17861 261 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 CCND2P30279 289 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 MCM2P49736 904 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 TAPT1Q6NXT6 567 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 BICD2Q8TD16 824 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 SCFD2Q8WU76 684 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 ZMYND12Q9H0C1 365 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 Q9Y3F1 56 aa17.21■□□□□ 0.35
RNF4-210ENST00000508235 RBM47A0AV96 593 aaKnown RBP17.2■□□□□ 0.34
RNF4-210ENST00000508235 DNM1LO00429 736 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 NKRFO15226 690 aaKnown RBP eCLIP17.2■□□□□ 0.345e-9■□□□□ 10.5
RNF4-210ENST00000508235 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 AP3B2Q13367 1082 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 TTLL4Q14679 1199 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 ANO1Q5XXA6 986 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 RNF180Q86T96 592 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 VSIG10LQ86VR7 867 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 WDR11Q9BZH6 1224 aa17.2■□□□□ 0.34
RNF4-210ENST00000508235 DDX49Q9Y6V7 483 aaKnown RBP17.2■□□□□ 0.34
RNF4-210ENST00000508235 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 LARGE1O95461 756 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 MYCLP12524 364 aaPredicted RBP17.19■□□□□ 0.34
RNF4-210ENST00000508235 UBE2SQ16763 222 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 DUSP28Q4G0W2 176 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 PCNX4Q63HM2 1172 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
RNF4-210ENST00000508235 PDGFCQ9NRA1 345 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
RNF4-210ENST00000508235 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 SMPD1P17405 629 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 NLRP5P59047 1200 aa17.18■□□□□ 0.34
RNF4-210ENST00000508235 MLLT1Q03111 559 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms