RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RMDN3Q96TC7 470 aa9.7□□□□□ -0.86
PDGFC-205ENST00000506880 SLC26A6Q9BXS9 759 aa9.7□□□□□ -0.86
PDGFC-205ENST00000506880 PAK6Q9NQU5 681 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-205ENST00000506880 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-205ENST00000506880 SMCO2A6NFE2 343 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 MYH7BA7E2Y1 1941 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 MEIS2O14770 477 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 OPLAHO14841 1288 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 COBLO75128 1261 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 CFBP00751 764 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 GJB1P08034 283 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 CYP3A4P08684 503 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 CYBAP13498 195 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 AKR1A1P14550 325 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
PDGFC-205ENST00000506880 RXRAP19793 462 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 CCND2P30279 289 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 SREBF1P36956 1147 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 SETQ01105 290 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-205ENST00000506880 BRDTQ58F21 947 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-205ENST00000506880 MUM1L1Q5H9M0 696 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 WWC2Q6AWC2 1192 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 RASGRP2Q7LDG7 609 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 VSIG10LQ86VR7 867 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 HSCBQ8IWL3 235 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 CCDC144CPQ8IYA2 1237 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 FAM184AQ8NB25 1140 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 SCFD2Q8WU76 684 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 SENP7Q9BQF6 1050 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 TMEM106CQ9BVX2 250 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 ARHGAP39Q9C0H5 1083 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 MCOLN1Q9GZU1 580 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 PXMP2Q9NR77 195 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 PCDHA4Q9UN74 947 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
PDGFC-205ENST00000506880 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 KPNA6O60684 536 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 DUSP11O75319 330 aaKnown RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 CYP2B6P20813 491 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 ICAM3P32942 547 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 CIITAP33076 1130 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 TRAPPC10P48553 1259 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 NLRP5P59047 1200 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 PDE4DQ08499 809 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 TTLL4Q14679 1199 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 ARHGEF16Q5VV41 709 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 ARMCX2Q7L311 632 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 KRT25Q7Z3Z0 450 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 NLRX1Q86UT6 975 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 TRIB2Q92519 343 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 GPRASP2Q96D09 838 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 PDCD2LQ9BRP1 358 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 PHF20Q9BVI0 1012 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 SPC25Q9HBM1 224 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 NCOA5Q9HCD5 579 aaKnown RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-205ENST00000506880 FAM184BQ9ULE4 1060 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 GABRQQ9UN88 632 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 FRMPD3Q5JV73 1810 aa9.68□□□□□ -0.86
PDGFC-205ENST00000506880 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 INHAP05111 366 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 NR3C2P08235 984 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 CST5P28325 142 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-205ENST00000506880 ACVR2BQ13705 512 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 FAM43BQ6ZT52 329 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-205ENST00000506880 BLIDQ8IZY5 108 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 ARRDC4Q8NCT1 418 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 FBXO18Q8NFZ0 1043 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 NPLOC4Q8TAT6 608 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 PHKBQ93100 1093 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 FGD4Q96M96 766 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 INPP4AQ96PE3 977 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-205ENST00000506880 ALG1Q9BT22 464 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 CRISPLD2Q9H0B8 497 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 CPVLQ9H3G5 476 aa9.67□□□□□ -0.86
PDGFC-205ENST00000506880 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 SOWAHBA6NEL2 793 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 M0R2N6 131 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 TBX3O15119 743 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 FIBPO43427 364 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 ZEB2O60315 1214 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 CABYRO75952 493 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 MMP1P03956 469 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 RARBP10826 455 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 PRKAR2AP13861 404 aaKnown RBP9.66□□□□□ -0.86
PDGFC-205ENST00000506880 CYP3A7P24462 503 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 KRT2P35908 639 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 GJA8P48165 433 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 CACNB2Q08289 660 aaPredicted RBP9.66□□□□□ -0.86
PDGFC-205ENST00000506880 STK3Q13188 491 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 NEDD9Q14511 834 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 PGM5Q15124 567 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 DUSP28Q4G0W2 176 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 SLC30A10Q6XR72 485 aa9.66□□□□□ -0.86
PDGFC-205ENST00000506880 CCDC82Q8N4S0 544 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms