RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PTGS1P23219 599 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 PDE4DQ08499 809 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 GJC2Q5T442 439 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 PHKBQ93100 1093 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 XPNPEP3Q9NQH7 507 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 TPCN1Q9ULQ1 816 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 SYNRGQ9UMZ2 1314 aa21.04■□□□□ 0.96
PDLIM7-216ENST00000506537 ADAMTS4O75173 837 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 DUSP11O75319 330 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 COL6A1P12109 1028 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 STK3Q13188 491 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 LRRC41Q15345 812 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 ARHGEF16Q5VV41 709 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 USP17L6PQ6QN14 398 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 NECAB2Q7Z6G3 386 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 IL31RAQ8NI17 732 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 C22orf23Q9BZE7 217 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 ALPK3Q96L96 1907 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 FRMPD4Q14CM0 1322 aa21.03■□□□□ 0.96
PDLIM7-216ENST00000506537 STXBP3O00186 592 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 PIK3CDO00329 1044 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 DNM1LO00429 736 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 IFNAR1P17181 557 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 SMPD1P17405 629 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 RBM25P49756 843 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 NEK4P51957 841 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 PKN1Q16512 942 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 IWS1Q96ST2 819 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 PDCD2LQ9BRP1 358 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 C11orf49Q9H6J7 331 aa21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 GNEQ9Y223 722 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-216ENST00000506537 RBM47A0AV96 593 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 MYADML2A6NDP7 307 aa21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 PRPF3O43395 683 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 TNFAIP2Q03169 654 aa21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 PFKFB3Q16875 520 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 ARRDC4Q8NCT1 418 aa21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 MPHOSPH6Q99547 160 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 UPF3AQ9H1J1 476 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 PSTPIP2Q9H939 334 aa21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 BARHL2Q9NY43 387 aa21.01■□□□□ 0.95
PDLIM7-216ENST00000506537 KIAA1217Q5T5P2 1943 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 B4DLN1 442 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 hCG_1984214I3L0E3 225 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 CTAGE5O15320 804 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 LARGE1O95461 756 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 MYCNP04198 464 aaPredicted RBP21■□□□□ 0.95
PDLIM7-216ENST00000506537 NR3C2P08235 984 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 SCG2P13521 617 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 MRPL12P52815 198 aaKnown RBP21■□□□□ 0.95
PDLIM7-216ENST00000506537 NAPAP54920 295 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 SCRN1Q12765 414 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 PGM5Q15124 567 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 ANKRD1Q15327 319 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 UBE2SQ16763 222 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 PPP1R18Q6NYC8 613 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 NOL8Q76FK4 1167 aaKnown RBP21■□□□□ 0.95
PDLIM7-216ENST00000506537 ZNF713Q8N859 430 aaPredicted RBP21■□□□□ 0.95
PDLIM7-216ENST00000506537 SLC26A6Q9BXS9 759 aa21■□□□□ 0.95
PDLIM7-216ENST00000506537 RNF26Q9BY78 433 aaPredicted RBP21■□□□□ 0.95
PDLIM7-216ENST00000506537 PFKFB2O60825 505 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 GJA9P57773 515 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 STXBP2Q15833 593 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 IQSEC1Q6DN90 963 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 KLHDC9Q8NEP7 349 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 SMARCC2Q8TAQ2 1214 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 CUL5Q93034 780 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 WDR11Q9BZH6 1224 aa20.99■□□□□ 0.95
PDLIM7-216ENST00000506537 KBTBD13C9JR72 458 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 RGS20O76081 388 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 ARIH2O95376 493 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 NKX3-2P78367 333 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 DUSP28Q4G0W2 176 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 CCSAPQ6IQ19 270 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 RNF180Q86T96 592 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 TLK2Q86UE8 772 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 VSIG10LQ86VR7 867 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 RIC8AQ9NPQ8 531 aa20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
PDLIM7-216ENST00000506537 C6orf222P0C671 652 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 MYCLP12524 364 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 CST5P28325 142 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 ME3Q16798 604 aa20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 SEPT14Q6ZU15 432 aa20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 SCFD2Q8WU76 684 aa20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 ZFP91Q96JP5 570 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 SLKQ9H2G2 1235 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 PHF24Q9UPV7 400 aa20.97■□□□□ 0.95
PDLIM7-216ENST00000506537 CPLX1O14810 134 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 ADAMTS3O15072 1205 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 DTNBO60941 627 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 EIF3JO75822 258 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 CCND2P30279 289 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 ADCY7P51828 1080 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 MRPS9P82933 396 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 CCDC62Q6P9F0 684 aa20.96■□□□□ 0.95
PDLIM7-216ENST00000506537 COPS5Q92905 334 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms