RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 GRIN2CQ14957 1233 aa28.82■■■□□ 2.2
HERC4-212ENST00000505760 IFIT1BQ5T764 474 aaKnown RBP28.82■■■□□ 2.2
HERC4-212ENST00000505760 HERVK_113Q902F9 699 aa28.82■■■□□ 2.2
HERC4-212ENST00000505760 PBX4Q9BYU1 374 aa28.82■■■□□ 2.2
HERC4-212ENST00000505760 VAT1LQ9HCJ6 419 aa28.82■■■□□ 2.2
HERC4-212ENST00000505760 SUPT16HQ9Y5B9 1047 aaKnown RBP28.82■■■□□ 2.2
HERC4-212ENST00000505760 TTLL4Q14679 1199 aa28.81■■■□□ 2.2
HERC4-212ENST00000505760 QRICH1Q2TAL8 776 aa28.81■■■□□ 2.2
HERC4-212ENST00000505760 MCF2L2Q86YR7 1114 aa28.81■■■□□ 2.2
HERC4-212ENST00000505760 TBC1D5Q92609 795 aa28.81■■■□□ 2.2
HERC4-212ENST00000505760 COPS5Q92905 334 aa28.81■■■□□ 2.2
HERC4-212ENST00000505760 TRMT13Q9NUP7 481 aaKnown RBP28.81■■■□□ 2.2
HERC4-212ENST00000505760 KPNA6O60684 536 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 PBX2P40425 430 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 FAM47CQ5HY64 1035 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 TTC22Q5TAA0 569 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 FBXO11Q86XK2 927 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 RPUSD2Q8IZ73 545 aaKnown RBP28.8■■■□□ 2.2
HERC4-212ENST00000505760 NSUN6Q8TEA1 469 aaKnown RBP28.8■■■□□ 2.2
HERC4-212ENST00000505760 WNT8AQ9H1J5 351 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 IL25Q9H293 177 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 JMJD4Q9H9V9 463 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 MRPL11Q9Y3B7 192 aaKnown RBP28.8■■■□□ 2.2
HERC4-212ENST00000505760 SCN10AQ9Y5Y9 1956 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 CHD9Q3L8U1 2897 aa28.8■■■□□ 2.2
HERC4-212ENST00000505760 MYO9BQ13459 2157 aa28.79■■■□□ 2.2
HERC4-212ENST00000505760 A6NJR5 290 aa28.79■■■□□ 2.2
HERC4-212ENST00000505760 PDE4AP27815 886 aa28.79■■■□□ 2.2
HERC4-212ENST00000505760 OTOP2Q7RTS6 562 aa28.79■■■□□ 2.2
HERC4-212ENST00000505760 SYTL5Q8TDW5 730 aaPredicted RBP28.79■■■□□ 2.2
HERC4-212ENST00000505760 CXXC1Q9P0U4 656 aaPredicted RBP28.79■■■□□ 2.2
HERC4-212ENST00000505760 CYP2C9P11712 490 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 GSPT1P15170 499 aaKnown RBP28.78■■■□□ 2.2
HERC4-212ENST00000505760 NBPF20Q3BBV1 942 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 SCLYQ96I15 445 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 TAAR1Q96RJ0 339 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 MSRAQ9UJ68 235 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 KIAA1217Q5T5P2 1943 aa28.78■■■□□ 2.2
HERC4-212ENST00000505760 VCANP13611 3396 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 TRDNQ13061 729 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 SEPT14Q6ZU15 432 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 RUFY2Q8WXA3 655 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 RMDN3Q96TC7 470 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 COL25A1Q9BXS0 654 aaPredicted RBP28.77■■■□□ 2.2
HERC4-212ENST00000505760 COL20A1Q9P218 1284 aa28.77■■■□□ 2.2
HERC4-212ENST00000505760 GBF1Q92538 1859 aa28.76■■■□□ 2.2
HERC4-212ENST00000505760 ARIH2O95376 493 aa28.76■■■□□ 2.19
HERC4-212ENST00000505760 RAB30Q15771 203 aa28.76■■■□□ 2.19
HERC4-212ENST00000505760 STXBP2Q15833 593 aa28.76■■■□□ 2.19
HERC4-212ENST00000505760 NFRKBQ6P4R8 1299 aa28.76■■■□□ 2.19
HERC4-212ENST00000505760 IWS1Q96ST2 819 aa28.76■■■□□ 2.19
HERC4-212ENST00000505760 SEC23AQ15436 765 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 ARHGEF16Q5VV41 709 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 CCDC62Q6P9F0 684 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 CYB5R4Q7L1T6 521 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 STAG2Q8N3U4 1231 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 AMNQ9BXJ7 453 aa28.75■■■□□ 2.19
HERC4-212ENST00000505760 KLRF2D3W0D1 207 aa28.74■■■□□ 2.19
HERC4-212ENST00000505760 CFBP00751 764 aa28.74■■■□□ 2.19
HERC4-212ENST00000505760 CHMP4BP1P59074 171 aa28.74■■■□□ 2.19
HERC4-212ENST00000505760 PPP1R13LQ8WUF5 828 aa28.74■■■□□ 2.19
HERC4-212ENST00000505760 SLC4A7Q9Y6M7 1214 aa28.74■■■□□ 2.19
HERC4-212ENST00000505760 U3KPZ7 1027 aaPredicted RBP28.74■■■□□ 2.19
HERC4-212ENST00000505760 ZBBXA8MT70 800 aa28.73■■■□□ 2.19
HERC4-212ENST00000505760 GH1P01241 217 aa28.73■■■□□ 2.19
HERC4-212ENST00000505760 PTPN11Q06124 597 aaPredicted RBP28.73■■■□□ 2.19
HERC4-212ENST00000505760 LY6KQ17RY6 165 aa28.73■■■□□ 2.19
HERC4-212ENST00000505760 AFG1LQ8WV93 481 aa28.73■■■□□ 2.19
HERC4-212ENST00000505760 GAS2L1Q99501 681 aaPredicted RBP28.73■■■□□ 2.19
HERC4-212ENST00000505760 SCN5AQ14524 2016 aa28.72■■■□□ 2.19
HERC4-212ENST00000505760 EIF2AK2P19525 551 aaKnown RBP28.72■■■□□ 2.19
HERC4-212ENST00000505760 CHST3Q7LGC8 479 aa28.72■■■□□ 2.19
HERC4-212ENST00000505760 MAD2L2Q9UI95 211 aa28.72■■■□□ 2.19
HERC4-212ENST00000505760 NOD1Q9Y239 953 aa28.72■■■□□ 2.19
HERC4-212ENST00000505760 PFKMP08237 780 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 CHMLP26374 656 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 DEFB128Q7Z7B8 93 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 PRDM12Q9H4Q4 367 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 SLC28A3Q9HAS3 691 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 PXMP2Q9NR77 195 aa28.71■■■□□ 2.19
HERC4-212ENST00000505760 ERICH2A1L162 156 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 ZBTB5O15062 677 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 EIF3JO75822 258 aaKnown RBP28.7■■■□□ 2.18
HERC4-212ENST00000505760 MMP3P08254 477 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 CYP21A2P08686 494 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 PTH1RQ03431 593 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 ARHGAP1Q07960 439 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 RALYLQ86SE5 291 aaKnown RBP28.7■■■□□ 2.18
HERC4-212ENST00000505760 RETREG2Q8NC44 543 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 NKX2-4Q9H2Z4 354 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 PCDHA1Q9Y5I3 950 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 CHD7Q9P2D1 2997 aa28.7■■■□□ 2.18
HERC4-212ENST00000505760 PALM3A6NDB9 673 aaPredicted RBP28.69■■■□□ 2.18
HERC4-212ENST00000505760 IFIT3O14879 490 aaKnown RBP28.69■■■□□ 2.18
HERC4-212ENST00000505760 NR3C2P08235 984 aa28.69■■■□□ 2.18
HERC4-212ENST00000505760 HSD17B4P51659 736 aa28.69■■■□□ 2.18
HERC4-212ENST00000505760 IRX6P78412 446 aaPredicted RBP28.69■■■□□ 2.18
HERC4-212ENST00000505760 VWCEQ96DN2 955 aa28.69■■■□□ 2.18
HERC4-212ENST00000505760 MTMR8Q96EF0 704 aa28.69■■■□□ 2.18
HERC4-212ENST00000505760 MYH7BA7E2Y1 1941 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms