RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 REPS2Q8NFH8 660 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 ARNTL2Q8WYA1 636 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 SCLYQ96I15 445 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 FGD4Q96M96 766 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 AGBL1Q96MI9 1066 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 NEUROD6Q96NK8 337 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 UBE2ZQ9H832 354 aaPredicted RBP8.53□□□□□ -1.04
VCAN-206ENST00000505615 CABP5Q9NP86 173 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 SNRKQ9NRH2 765 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 ZHX1Q9UKY1 873 aaPredicted RBP8.53□□□□□ -1.04
VCAN-206ENST00000505615 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
VCAN-206ENST00000505615 MYO15AQ9UKN7 3530 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 PLXNA3P51805 1871 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 ASTN1O14525 1302 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 GRIN2DO15399 1336 aa8.53□□□□□ -1.04
VCAN-206ENST00000505615 LCTP09848 1927 aa8.52□□□□□ -1.04
VCAN-206ENST00000505615 DNAJC25-GNG10A0A024R161 153 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.52□□□□□ -1.05
VCAN-206ENST00000505615 FDX1P10109 184 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 ALADP13716 330 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 KCTD2Q14681 263 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 LEXMQ3ZCV2 418 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 HFE2Q6ZVN8 426 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 CLEC10AQ8IUN9 316 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 SIAH1Q8IUQ4 282 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.52□□□□□ -1.05
VCAN-206ENST00000505615 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 VTI1AQ96AJ9 217 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 KATNBL1Q9H079 304 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 PIH1D3Q9NQM4 214 aaKnown RBP8.52□□□□□ -1.05
VCAN-206ENST00000505615 FBXO28Q9NVF7 368 aa8.52□□□□□ -1.05
VCAN-206ENST00000505615 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.05
VCAN-206ENST00000505615 DCXO43602 365 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 B4GALT4O60513 344 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 STAT3P40763 770 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 BEX3Q00994 111 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 ACVR2BQ13705 512 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 CCDC144BQ3MJ40 725 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 GORABQ5T7V8 394 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 CXCL17Q6UXB2 119 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 RPUSD2Q8IZ73 545 aaKnown RBP8.51□□□□□ -1.05
VCAN-206ENST00000505615 SPICE1Q8N0Z3 855 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 PRSS33Q8NF86 280 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 GDPD5Q8WTR4 605 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 SLC9A7Q96T83 725 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 MEIS3Q99687 375 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 TRPV6Q9H1D0 765 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 VCPKMTQ9H867 229 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 VPS13AQ96RL7 3174 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 NCOR2Q9Y618 2525 aa8.51□□□□□ -1.05
VCAN-206ENST00000505615 VWA5AO00534 786 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 WDR46O15213 610 aaKnown RBP8.5□□□□□ -1.05
VCAN-206ENST00000505615 PFKMP08237 780 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 CYP7A1P22680 504 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
VCAN-206ENST00000505615 ZAP70P43403 619 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 USP5P45974 858 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 MTX1Q13505 466 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 MIGA1Q8NAN2 632 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 SPC25Q9HBM1 224 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 LMCD1Q9NZU5 365 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 PPP1R9AQ9ULJ8 1098 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 TMX2Q9Y320 296 aa8.5□□□□□ -1.05
VCAN-206ENST00000505615 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 WDR87Q6ZQQ6 2873 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 EP300Q09472 2414 aaPredicted RBP8.49□□□□□ -1.05
VCAN-206ENST00000505615 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.49□□□□□ -1.05
VCAN-206ENST00000505615 LCHNA4D1U4 455 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 SRGAP3O43295 1099 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 IGSF3O75054 1194 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 KCNA5P22460 613 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 PTGS1P23219 599 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 COPB2P35606 906 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 FOXK2Q01167 660 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 TMEM179Q6ZVK1 233 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
VCAN-206ENST00000505615 HERC6Q8IVU3 1022 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 MAGEB6Q8N7X4 407 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 PHOSPHO2Q8TCD6 241 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 DBNDD2Q9BQY9 259 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 ABHD16BQ9H3Z7 469 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 GNEQ9Y223 722 aaKnown RBP8.49□□□□□ -1.05
VCAN-206ENST00000505615 RIPK3Q9Y572 518 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 DMDP11532 3685 aa8.49□□□□□ -1.05
VCAN-206ENST00000505615 MPHOSPH10O00566 681 aaKnown RBP8.48□□□□□ -1.05
VCAN-206ENST00000505615 CABYRO75952 493 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 PSMC6P62333 389 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 ICA1Q05084 483 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 ZP2Q05996 745 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms