RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CPLX1O14810 134 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SNPHO15079 494 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 ADCY6O43306 1168 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SNAI1O95863 264 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PGK2P07205 417 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SYT1P21579 422 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 HOXA13P31271 388 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 COPB2P35606 906 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 SLC4A3P48751 1232 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 FLT3LGP49771 235 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 LBX1P52954 281 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 CCNA1P78396 465 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MAP2K5Q13163 448 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 NR5A1Q13285 461 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PLS1Q14651 629 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 UBE2SQ16763 222 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 RNF207Q6ZRF8 634 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 HEATR3Q7Z4Q2 680 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 ZNF467Q7Z7K2 595 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 NCAPG2Q86XI2 1143 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 RASGRP4Q8TDF6 673 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 TRIB2Q92519 343 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MBOAT7Q96N66 472 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 ALG1Q9BT22 464 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 TMEM260Q9NX78 707 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 FBXO40Q9UH90 709 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 NAP1L2Q9ULW6 460 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PCDHA6Q9UN73 950 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PCDHA4Q9UN74 947 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 MRPL11Q9Y3B7 192 aaKnown RBP5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PCDHA8Q9Y5H6 950 aa5.69□□□□□ -1.5
LMNB1-208ENST00000504788 PFASO15067 1338 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 BTBD18B2RXH4 712 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 GNRH1P01148 92 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 FCER1AP12319 257 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 VASPP50552 380 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-208ENST00000504788 TOB1P50616 345 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-208ENST00000504788 TRIM32Q13049 653 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 SEMA3FQ13275 785 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PGM5Q15124 567 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 TMEM63BQ5T3F8 832 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 TRIM22Q8IYM9 498 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 TRPV1Q8NER1 839 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 DNERQ8NFT8 737 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PXYLP1Q8TE99 480 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PGBD1Q96JS3 809 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PDCD2LQ9BRP1 358 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PSTPIP2Q9H939 334 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 PXMP2Q9NR77 195 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 SEC63Q9UGP8 760 aaKnown RBP5.68□□□□□ -1.5
LMNB1-208ENST00000504788 MTMR6Q9Y217 621 aa5.68□□□□□ -1.5
LMNB1-208ENST00000504788 LOC102724159A0A0B4J2E5 919 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 TNPO2O14787 897 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CFBP00751 764 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CYP3A4P08684 503 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 FAM86B2P0C5J1 330 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ZNF865P0CJ78 1059 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CIITAP33076 1130 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 SREBF1P36956 1147 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CTCFP49711 727 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ALDH5A1P51649 535 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 NAPAP54920 295 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 FCGRTP55899 365 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 PWP2Q15269 919 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 OLFML2BQ68BL8 750 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 GALNT17Q6IS24 598 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 TAPT1Q6NXT6 567 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CPLX2Q6PUV4 134 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 NSMFQ6X4W1 530 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 HSCBQ8IWL3 235 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 DIS3L2Q8IYB7 885 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 BLIDQ8IZY5 108 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ANKRD35Q8N283 1001 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CYP2W1Q8TAV3 490 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 SOCS4Q8WXH5 440 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CUL5Q93034 780 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 KIF12Q96FN5 646 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ERO1AQ96HE7 468 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 INPP4AQ96PE3 977 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 MMP19Q99542 508 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 APBA2Q99767 749 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 NUDT12Q9BQG2 462 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 TSPYL2Q9H2G4 693 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 PRDM10Q9NQV6 1147 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ISY1Q9ULR0 285 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 PTPN22Q9Y2R2 807 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 SYNGAP1Q96PV0 1343 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CYP3A7-CYP3A51PA0A087WV96 503 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 GCOM1H8Y6P7 765 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CTAGE5O15320 804 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ECM2O94769 699 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-208ENST00000504788 NR3C2P08235 984 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 POLR2MP0CAP2 368 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 CYBAP13498 195 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 ITGB5P18084 799 aa5.67□□□□□ -1.5
LMNB1-208ENST00000504788 PTGS1P23219 599 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms