RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 NKRFO15226 690 aaKnown RBP eCLIP24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 DYNC1LI2O43237 492 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 ZEB2O60315 1214 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 PLEKHA8P1O95397 391 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 ASGR1P07306 291 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 POLR2MP0CAP2 368 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 RXRAP19793 462 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 RCAN1P53805 252 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 HABP4Q5JVS0 413 aaKnown RBP24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 BLOC1S2Q6QNY1 142 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 TMTC3Q6ZXV5 915 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 TCEANC2Q96MN5 208 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 PRKAG2Q9UGJ0 569 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 ELP1O95163 1332 aa24.49■■□□□ 1.51
TRAPPC11-203ENST00000504526 CTAGE5O15320 804 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 ZBTB43O43298 467 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 SYN1P17600 705 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 PPP2R5BQ15173 497 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 STXBP2Q15833 593 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 FSCN1Q16658 493 aaKnown RBP24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 TRIM60Q495X7 471 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 PIBF1Q8WXW3 757 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 PXMP2Q9NR77 195 aa24.48■■□□□ 1.51
TRAPPC11-203ENST00000504526 CABYRO75952 493 aa24.47■■□□□ 1.51
TRAPPC11-203ENST00000504526 PRO3102Q9H379 93 aa24.47■■□□□ 1.51
TRAPPC11-203ENST00000504526 EIF3JO75822 258 aaKnown RBP24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 NR3C2P08235 984 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 EIF2AK2P19525 551 aaKnown RBP24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 TTLL4Q14679 1199 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 RTN1Q16799 776 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 RAB11FIP4Q86YS3 637 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 FBXL16Q8N461 479 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 GDF15Q99988 308 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 USP26Q9BXU7 913 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 BRPF3Q9ULD4 1205 aa24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 BAZ2BQ9UIF8 2168 aaKnown RBP24.46■■□□□ 1.51
TRAPPC11-203ENST00000504526 KLF18A0A0U1RQI7 1052 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 A0A1W2PPC1 479 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 HOXA13P31271 388 aaPredicted RBP24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 BMP8BP34820 402 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 IRX5P78411 483 aaPredicted RBP24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 BEX3Q00994 111 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 BRDTQ58F21 947 aaPredicted RBP24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 VTI1AQ96AJ9 217 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 TOX2Q96NM4 488 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 PDCD2LQ9BRP1 358 aa24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 RBM27Q9P2N5 1060 aaKnown RBP24.45■■□□□ 1.5
TRAPPC11-203ENST00000504526 MROH7Q68CQ1 1323 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 GOLGA8AA7E2F4 631 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 GOLGA8BA8MQT2 603 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 EIF5BO60841 1220 aaKnown RBP24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 TXNP10599 105 aaKnown RBP24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 RPS6KB1P23443 525 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 CPT1AP50416 773 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 TLE2Q04725 743 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 Q6ZUG5 572 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 ANKRD33Q7Z3H0 272 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 CMTR1Q8N1G2 835 aaKnown RBP24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 OR6J1Q8NGC5 347 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 CUL5Q93034 780 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 SEZ6LQ9BYH1 1024 aa24.44■■□□□ 1.5
TRAPPC11-203ENST00000504526 A0A0U1RQG5 324 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 CPA1P15085 419 aa24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 CASTP20810 708 aaKnown RBP24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 MAGEA10P43363 369 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 TMEM63BQ5T3F8 832 aa24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 CCDC82Q8N4S0 544 aa24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 LBHD1Q9BQE6 289 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 AGXT2Q9BYV1 514 aa24.43■■□□□ 1.5
TRAPPC11-203ENST00000504526 CCDC196A0A1B0GTZ2 297 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 CCDC62Q6P9F0 684 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 SEPT14Q6ZU15 432 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 FCHSD1Q86WN1 690 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 BRF1Q92994 677 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 PDLIM7Q9NR12 457 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 POLR3EQ9NVU0 708 aa24.42■■□□□ 1.5
TRAPPC11-203ENST00000504526 DCDC2CA8MYV0 355 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 ARVCFO00192 962 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 PIK3CDO00329 1044 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 PQBP1O60828 265 aaKnown RBP24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 CLTBP09497 229 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 CCND2P30279 289 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 PGM5Q15124 567 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 CXCL17Q6UXB2 119 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 VSIG10LQ86VR7 867 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 SMARCC2Q8TAQ2 1214 aa24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 PRDM5Q9NQX1 630 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 NAP1L2Q9ULW6 460 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC11-203ENST00000504526 CNTNAP5Q8WYK1 1306 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 KPNA6O60684 536 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 PTGS1P23219 599 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 METAP2P50579 478 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 CDK7P50613 346 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 APOBRQ0VD83 1088 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 KCNV1Q6PIU1 500 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 RUFY3Q7L099 469 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 TM6SF1Q9BZW5 370 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 ZSWIM6Q9HCJ5 1215 aa24.4■■□□□ 1.5
TRAPPC11-203ENST00000504526 FRMPD4Q14CM0 1322 aa24.39■■□□□ 1.5
TRAPPC11-203ENST00000504526 A6NJR5 290 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms