RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PWP2Q15269 919 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 SLC30A10Q6XR72 485 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 MSL3Q8N5Y2 521 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 TRIB2Q92519 343 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 FGD4Q96M96 766 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 LLPHQ9BRT6 129 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 FLRT1Q9NZU1 646 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
PDLIM5-208ENST00000504489 GCOM1H8Y6P7 765 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 CFBP00751 764 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 POLR2MP0CAP2 368 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 CALML3P27482 149 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 NAPAP54920 295 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 NSUN7Q8NE18 718 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 DNERQ8NFT8 737 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 SYTL5Q8TDW5 730 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 ARMC5Q96C12 935 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
PDLIM5-208ENST00000504489 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 ESYT2A0FGR8 921 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 SH3TC2Q8TF17 1288 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 CUL5Q93034 780 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 PURBQ96QR8 312 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 ZMYND12Q9H0C1 365 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 RIC8AQ9NPQ8 531 aa13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-208ENST00000504489 ASTN1O14525 1302 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 ASB14A6NK59 587 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 MEIS2O14770 477 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 INHAP05111 366 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 ALDH5A1P51649 535 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 UBXN2AP68543 259 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 WASF1Q92558 559 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 SNX21Q969T3 373 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 BIN2Q9UBW5 565 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 NRBP1Q9UHY1 535 aa13.68□□□□□ -0.22
PDLIM5-208ENST00000504489 B4DLN1 442 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 JAK2O60674 1132 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 SNAI1O95863 264 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 EDNRBP24530 442 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 CYP2C19P33261 490 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 ADCY7P51828 1080 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 TRIM32Q13049 653 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 TNS4Q8IZW8 715 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 SHISA4Q96DD7 197 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 IWS1Q96ST2 819 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
PDLIM5-208ENST00000504489 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 XBP1P17861 261 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 GNA11P29992 359 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 CUL4AQ13619 759 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 FCHSD1Q86WN1 690 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 AIFM3Q96NN9 605 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-208ENST00000504489 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
PDLIM5-208ENST00000504489 DTNBO60941 627 aa13.65□□□□□ -0.22
PDLIM5-208ENST00000504489 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-208ENST00000504489 CYBAP13498 195 aa13.65□□□□□ -0.22
PDLIM5-208ENST00000504489 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms