RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GBP6Q6ZN66 633 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 SPATA4Q8NEY3 305 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 MTMR9Q96QG7 549 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 PLIN2Q99541 437 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 RIC8AQ9NPQ8 531 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
SNF8-203ENST00000504000 A0A0U1RQG5 324 aaPredicted RBP16.64■□□□□ 0.25
SNF8-203ENST00000504000 MACROD2A1Z1Q3 448 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 USP17L3A6NCW0 530 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 USP17L4A6NCW7 530 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 SMCO2A6NFE2 343 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 ZNF185O15231 689 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 FCER1AP12319 257 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 RASA1P20936 1047 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 GGCXP38435 758 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 MAGEA9P43362 315 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 KIF11P52732 1056 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 LETM2Q2VYF4 491 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 PROM2Q8N271 834 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 SYN2Q92777 582 aaPredicted RBP16.64■□□□□ 0.25
SNF8-203ENST00000504000 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
SNF8-203ENST00000504000 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 SH3GL2Q99962 352 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 FAM107BQ9H098 131 aa16.64■□□□□ 0.25
SNF8-203ENST00000504000 GOLGA6BA6NDN3 693 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 MYBL2P10244 700 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 EPB41P11171 864 aaKnown RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 NNTQ13423 1086 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 ASTE1Q2TB18 679 aaPredicted RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 GOLGA8KD6RF30 607 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 TECP42680 631 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 CORO7P57737 925 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 EHHADHQ08426 723 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 GRB10Q13322 594 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 SEPT2Q15019 361 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 SOGA3Q5TF21 947 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 ALS2CLQ60I27 953 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 SH3RF3Q8TEJ3 882 aaPredicted RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 OSBPL9Q96SU4 736 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
SNF8-203ENST00000504000 AHDC1Q5TGY3 1603 aaPredicted RBP16.63■□□□□ 0.25
SNF8-203ENST00000504000 EPHB4P54760 987 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
SNF8-203ENST00000504000 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 C16orf86Q6ZW13 317 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 C10orf67Q8IYJ2 551 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 BAP1Q92560 729 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
SNF8-203ENST00000504000 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 EFCC1Q9HA90 598 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 PODXL2Q9NZ53 605 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 SEC63Q9UGP8 760 aaKnown RBP16.62■□□□□ 0.25
SNF8-203ENST00000504000 NARFQ9UHQ1 456 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 CAPN6Q9Y6Q1 641 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 NAV1Q8NEY1 1877 aa16.62■□□□□ 0.25
SNF8-203ENST00000504000 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 TRIM66O15016 1216 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 OPA1O60313 960 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 GOLGA6DP0CG33 693 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 TM4SF1P30408 202 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
SNF8-203ENST00000504000 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 DNAJC21Q5F1R6 531 aaKnown RBP16.61■□□□□ 0.25
SNF8-203ENST00000504000 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 KRT26Q7Z3Y9 468 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
SNF8-203ENST00000504000 LINC00116Q8NCU8 138 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
SNF8-203ENST00000504000 GOLGA6AQ9NYA3 693 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 MYMKA6NI61 221 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 AKR1B10O60218 316 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 PLEKP08567 350 aaPredicted RBP16.61■□□□□ 0.25
SNF8-203ENST00000504000 PAFAH1B1P43034 410 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 LRRC55Q6ZSA7 311 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 TXNRD3Q86VQ6 643 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 DEF6Q9H4E7 631 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 STIM2Q9P246 746 aa16.61■□□□□ 0.25
SNF8-203ENST00000504000 MAGEA1P43355 309 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms