RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 BLOC1S4Q9NUP1 217 aa24■■□□□ 1.43
UBE2D3-216ENST00000503742 TAL1P17542 331 aaPredicted RBP23.99■■□□□ 1.43
UBE2D3-216ENST00000503742 PRCPP42785 496 aa23.99■■□□□ 1.43
UBE2D3-216ENST00000503742 ARHGAP4P98171 946 aa23.99■■□□□ 1.43
UBE2D3-216ENST00000503742 PAK1Q13153 545 aa23.99■■□□□ 1.43
UBE2D3-216ENST00000503742 SREBF1P36956 1147 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 AMPD3Q01432 767 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 SAMD7Q7Z3H4 446 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 ADSSL1Q8N142 457 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 NUDT12Q9BQG2 462 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 A0A1B0GTH6 734 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 SKILP12757 684 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 TMEM119Q4V9L6 283 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 KRT79Q5XKE5 535 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 FAM160B2Q86V87 743 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 GIMAP8Q8ND71 665 aaPredicted RBP23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 PCDHA12Q9UN75 941 aa23.98■■□□□ 1.43
UBE2D3-216ENST00000503742 NR1I3Q14994 352 aa23.97■■□□□ 1.43
UBE2D3-216ENST00000503742 NLGN2Q8NFZ4 835 aa23.97■■□□□ 1.43
UBE2D3-216ENST00000503742 SNX29Q8TEQ0 813 aa23.97■■□□□ 1.43
UBE2D3-216ENST00000503742 NELFBQ8WX92 580 aa23.97■■□□□ 1.43
UBE2D3-216ENST00000503742 SPDYE3A6NKU9 549 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 ZYXQ15942 572 aaKnown RBP23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 CCDC84Q86UT8 332 aaPredicted RBP23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 GJA10Q969M2 543 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 FEM1BQ9UK73 627 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 GJA3Q9Y6H8 435 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 ASTN2O75129 1339 aaPredicted RBP23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 SFPQP23246 707 aaKnown RBP eCLIP23.96■■□□□ 1.433e-6■□□□□ 10.5
UBE2D3-216ENST00000503742 Q4G0T1 1027 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 HYIQ5T013 277 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 SV2BQ7L1I2 683 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 GINM1Q9NU53 330 aa23.96■■□□□ 1.43
UBE2D3-216ENST00000503742 PSDA5PKW4 1024 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 CIITAP33076 1130 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 TBX2Q13207 712 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 TBC1D10BQ4KMP7 808 aaPredicted RBP23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 LARP4BQ92615 738 aaKnown RBP23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 RAD54LQ92698 747 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 KIFC2Q96AC6 838 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 CDK5RAP3Q96JB5 506 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 HACL1Q9UJ83 578 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 ZNF541Q9H0D2 1346 aa23.95■■□□□ 1.42
UBE2D3-216ENST00000503742 MARCH6O60337 910 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 SLFN12Q8IYM2 578 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 ETNPPLQ8TBG4 499 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 LENG9Q96B70 501 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 TBX3O15119 743 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 SLC26A4O43511 780 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 CYP3A4P08684 503 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 HOXA13P31271 388 aaPredicted RBP23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 ASIC1P78348 528 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 MCM6Q14566 821 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 ECM1Q16610 540 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 KIF4BQ2VIQ3 1234 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 CCDC47Q96A33 483 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 CTAGE1Q96RT6 745 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 GTPBP4Q9BZE4 634 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 ADD3Q9UEY8 706 aaKnown RBP23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 MAPK8IP1Q9UQF2 711 aa23.94■■□□□ 1.42
UBE2D3-216ENST00000503742 CNNM4Q6P4Q7 775 aa23.93■■□□□ 1.42
UBE2D3-216ENST00000503742 CCDC174Q6PII3 467 aa23.93■■□□□ 1.42
UBE2D3-216ENST00000503742 DEFB129Q9H1M3 183 aa23.93■■□□□ 1.42
UBE2D3-216ENST00000503742 KCND1Q9NSA2 647 aa23.93■■□□□ 1.42
UBE2D3-216ENST00000503742 FBXO28Q9NVF7 368 aa23.93■■□□□ 1.42
UBE2D3-216ENST00000503742 MYMKA6NI61 221 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 LRRC10BA6NIK2 292 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 CTNND1O60716 968 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 COBLO75128 1261 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 PTPN21Q16825 1174 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 TPD52L1Q16890 204 aaPredicted RBP23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 KCNK18Q7Z418 384 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 UPF1Q92900 1129 aaKnown RBP eCLIP23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 EXOC1Q9NV70 894 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 R3HCC1Q9Y3T6 440 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 FAM86B1E9PN63 330 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 FAM86B2P0C5J1 330 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 TERF1P54274 439 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 PDE4DQ08499 809 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 STIM1Q13586 685 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 COBLL1Q53SF7 1204 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 SPECC1LQ69YQ0 1117 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 LIMA1Q9UHB6 759 aaKnown RBP23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 KDM3AQ9Y4C1 1321 aa23.92■■□□□ 1.42
UBE2D3-216ENST00000503742 H7C1D1 291 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 SPIRE1Q08AE8 756 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 PRR16Q569H4 304 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 DNTTIP2Q5QJE6 756 aaKnown RBP23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 DHTKD1Q96HY7 919 aaPredicted RBP23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 KIAA1683Q9H0B3 1180 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 MRPL11Q9Y3B7 192 aaKnown RBP23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 PVALEFA0A1B0GWK0 134 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 INPP5BP32019 993 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 PBX1P40424 430 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 KCNJ6P48051 423 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 SPAG1Q07617 926 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 TBC1D5Q92609 795 aa23.91■■□□□ 1.42
UBE2D3-216ENST00000503742 LPAR1Q92633 364 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms