RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 PDE4DQ08499 809 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 MICALL1Q8N3F8 863 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 EVI5LQ96CN4 794 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 C1QTNF1Q9BXJ1 281 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 COG5Q9UP83 839 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
DDR1-247ENST00000502955 FRMPD2Q68DX3 1309 aaPredicted RBP16.16■□□□□ 0.18
DDR1-247ENST00000502955 TET1Q8NFU7 2136 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 EPOPA6NHQ4 379 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 B4DLN1 442 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 FGAP02671 866 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
DDR1-247ENST00000502955 TAP1Q03518 808 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 ZNF543Q08ER8 600 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 BFSP2Q13515 415 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 FAM47CQ5HY64 1035 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 HERC6Q8IVU3 1022 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 RGS22Q8NE09 1264 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 TTC14Q96N46 770 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 GPCPD1Q9NPB8 672 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 RAPGEFL1Q9UHV5 662 aa16.15■□□□□ 0.18
DDR1-247ENST00000502955 KIF28PB7ZC32 967 aa16.14■□□□□ 0.17
DDR1-247ENST00000502955 TXNP10599 105 aaKnown RBP16.14■□□□□ 0.17
DDR1-247ENST00000502955 PCP11498 1178 aaKnown RBP16.14■□□□□ 0.17
DDR1-247ENST00000502955 PLA2G5P39877 138 aa16.14■□□□□ 0.17
DDR1-247ENST00000502955 KCNQ1P51787 676 aa16.14■□□□□ 0.17
DDR1-247ENST00000502955 SESTD1Q86VW0 696 aa16.14■□□□□ 0.17
DDR1-247ENST00000502955 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
DDR1-247ENST00000502955 NECAB3Q96P71 396 aaPredicted RBP16.14■□□□□ 0.17
DDR1-247ENST00000502955 PTPRSQ13332 1948 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 RFXAPO00287 272 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 RBL2Q08999 1139 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 SKIV2LQ15477 1246 aaKnown RBP16.13■□□□□ 0.17
DDR1-247ENST00000502955 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
DDR1-247ENST00000502955 CCDC155Q8N6L0 562 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 COPS5Q92905 334 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
DDR1-247ENST00000502955 TRIP12Q14669 1992 aaPredicted RBP16.13■□□□□ 0.17
DDR1-247ENST00000502955 ARHGEF15O94989 841 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 ARIH2O95376 493 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 PARNO95453 639 aaKnown RBP16.12■□□□□ 0.17
DDR1-247ENST00000502955 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
DDR1-247ENST00000502955 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
DDR1-247ENST00000502955 CCDC62Q6P9F0 684 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 AFAP1L1Q8TED9 768 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 ARNTL2Q8WYA1 636 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 CTAGE1Q96RT6 745 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDR1-247ENST00000502955 CERS4Q9HA82 394 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 NOD1Q9Y239 953 aa16.12■□□□□ 0.17
DDR1-247ENST00000502955 ARIH1Q9Y4X5 557 aaPredicted RBP16.12■□□□□ 0.17
DDR1-247ENST00000502955 TLL1O43897 1013 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 LPXNO60711 386 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 MMP3P08254 477 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 NT5C2P49902 561 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 GPNMBQ14956 572 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 PTGISQ16647 500 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 HLA-CQ95604 372 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 LMCD1Q9NZU5 365 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
DDR1-247ENST00000502955 COL4A4P53420 1690 aaPredicted RBP16.11■□□□□ 0.17
DDR1-247ENST00000502955 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 CXCL10P02778 98 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 KCNJ6P48051 423 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 WDR5P61964 334 aaKnown RBP16.1■□□□□ 0.17
DDR1-247ENST00000502955 GRB10Q13322 594 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 KRT40Q6A162 431 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 PPP1R13LQ8WUF5 828 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 KAT2BQ92831 832 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 FAM122AQ96E09 287 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 FAM227BQ96M60 508 aa16.1■□□□□ 0.17
DDR1-247ENST00000502955 GH1P01241 217 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 SELPP16109 830 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 PDE1AP54750 535 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 ARHGAP1Q07960 439 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
DDR1-247ENST00000502955 MFSD6Q6ZSS7 791 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
DDR1-247ENST00000502955 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 AFG1LQ8WV93 481 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 EMID1Q96A84 441 aaPredicted RBP16.09■□□□□ 0.17
DDR1-247ENST00000502955 IWS1Q96ST2 819 aa16.09■□□□□ 0.17
DDR1-247ENST00000502955 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
DDR1-247ENST00000502955 LY6KQ17RY6 165 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 USH1GQ495M9 461 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 CNKSR3Q6P9H4 555 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
DDR1-247ENST00000502955 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.16
DDR1-247ENST00000502955 ESR2Q92731 530 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 RNF41Q9H4P4 317 aaPredicted RBP16.08■□□□□ 0.16
DDR1-247ENST00000502955 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
DDR1-247ENST00000502955 GTF2IRD1Q9UHL9 959 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 ABCB11O95342 1321 aa16.08■□□□□ 0.16
DDR1-247ENST00000502955 BRWD1Q9NSI6 2320 aa16.07■□□□□ 0.16
DDR1-247ENST00000502955 ABHD14A-ACY1A0A1B0GW23 586 aa16.07■□□□□ 0.16
DDR1-247ENST00000502955 EFCAB14O75071 495 aa16.07■□□□□ 0.16
DDR1-247ENST00000502955 GJB5O95377 273 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms