RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 A0A0D9SFI3 127 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 SNHG28P0DPA3 235 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 HSPD1P10809 573 aaKnown RBP25.58■■□□□ 1.69
CLIC4-204ENST00000497755 ACTN1P12814 892 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 TFF2Q03403 129 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 IL27Q8NEV9 243 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 PHOSPHO2Q8TCD6 241 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 CERS4Q9HA82 394 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 RAPGEFL1Q9UHV5 662 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 MTCH2Q9Y6C9 303 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 TRIP12Q14669 1992 aaPredicted RBP25.58■■□□□ 1.69
CLIC4-204ENST00000497755 WDR19Q8NEZ3 1342 aa25.58■■□□□ 1.69
CLIC4-204ENST00000497755 PITPNM1O00562 1244 aa25.57■■□□□ 1.68
CLIC4-204ENST00000497755 TXNP10599 105 aaKnown RBP25.57■■□□□ 1.68
CLIC4-204ENST00000497755 PDE1AP54750 535 aa25.57■■□□□ 1.68
CLIC4-204ENST00000497755 PTPN11Q06124 597 aaPredicted RBP25.57■■□□□ 1.68
CLIC4-204ENST00000497755 RETREG2Q8NC44 543 aa25.57■■□□□ 1.68
CLIC4-204ENST00000497755 NECAB3Q96P71 396 aaPredicted RBP25.57■■□□□ 1.68
CLIC4-204ENST00000497755 MPHOSPH6Q99547 160 aaKnown RBP25.57■■□□□ 1.68
CLIC4-204ENST00000497755 RAD50Q92878 1312 aa25.57■■□□□ 1.68
CLIC4-204ENST00000497755 EPOPA6NHQ4 379 aa25.56■■□□□ 1.68
CLIC4-204ENST00000497755 ARIH2O95376 493 aa25.56■■□□□ 1.68
CLIC4-204ENST00000497755 HAND2P61296 217 aa25.56■■□□□ 1.68
CLIC4-204ENST00000497755 RGS22Q8NE09 1264 aa25.56■■□□□ 1.68
CLIC4-204ENST00000497755 SLC9A7Q96T83 725 aa25.56■■□□□ 1.68
CLIC4-204ENST00000497755 ARHGEF15O94989 841 aa25.55■■□□□ 1.68
CLIC4-204ENST00000497755 ZNF589Q86UQ0 364 aaPredicted RBP25.55■■□□□ 1.68
CLIC4-204ENST00000497755 FTOQ9C0B1 505 aaKnown RBP eCLIP25.55■■□□□ 1.68
CLIC4-204ENST00000497755 ZBTB47Q9UFB7 747 aaPredicted RBP25.55■■□□□ 1.68
CLIC4-204ENST00000497755 ZMYM6O95789 1325 aa25.55■■□□□ 1.68
CLIC4-204ENST00000497755 TAP1Q03518 808 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 BFSP2Q13515 415 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 CCDC62Q6P9F0 684 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 MFSD6Q6ZSS7 791 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 TICAM2Q86XR7 235 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 HERC6Q8IVU3 1022 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 TBC1D5Q92609 795 aa25.54■■□□□ 1.68
CLIC4-204ENST00000497755 B4DLN1 442 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 GOLGA8HP0CJ92 632 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 KCNQ1P51787 676 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 MRPL12P52815 198 aaKnown RBP25.53■■□□□ 1.68
CLIC4-204ENST00000497755 NMIQ13287 307 aaPredicted RBP25.53■■□□□ 1.68
CLIC4-204ENST00000497755 SKIV2LQ15477 1246 aaKnown RBP25.53■■□□□ 1.68
CLIC4-204ENST00000497755 KRT40Q6A162 431 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 UBA5Q9GZZ9 404 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 CPVLQ9H3G5 476 aa25.53■■□□□ 1.68
CLIC4-204ENST00000497755 GTPBP6O43824 516 aaPredicted RBP25.52■■□□□ 1.68
CLIC4-204ENST00000497755 PCP11498 1178 aaKnown RBP25.52■■□□□ 1.68
CLIC4-204ENST00000497755 GPNMBQ14956 572 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 AAK1Q2M2I8 961 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 USH1GQ495M9 461 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 TBC1D10CQ8IV04 446 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 AFG1LQ8WV93 481 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 CTAGE1Q96RT6 745 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 NOD1Q9Y239 953 aa25.52■■□□□ 1.68
CLIC4-204ENST00000497755 KIF28PB7ZC32 967 aa25.51■■□□□ 1.67
CLIC4-204ENST00000497755 CHMP4BP1P59074 171 aa25.51■■□□□ 1.67
CLIC4-204ENST00000497755 PTGISQ16647 500 aa25.51■■□□□ 1.67
CLIC4-204ENST00000497755 GPATCH4Q5T3I0 446 aaKnown RBP25.51■■□□□ 1.67
CLIC4-204ENST00000497755 ARNTL2Q8WYA1 636 aa25.51■■□□□ 1.67
CLIC4-204ENST00000497755 ZKSCAN3Q9BRR0 538 aa25.51■■□□□ 1.67
CLIC4-204ENST00000497755 LY6KQ17RY6 165 aa25.5■■□□□ 1.67
CLIC4-204ENST00000497755 CCDC171Q6TFL3 1326 aa25.5■■□□□ 1.67
CLIC4-204ENST00000497755 DGKHQ86XP1 1220 aa25.5■■□□□ 1.67
CLIC4-204ENST00000497755 TAAR1Q96RJ0 339 aa25.5■■□□□ 1.67
CLIC4-204ENST00000497755 TANC1Q9C0D5 1861 aa25.5■■□□□ 1.67
CLIC4-204ENST00000497755 BAIAP3O94812 1187 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 ARHGAP1Q07960 439 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 GDF6Q6KF10 455 aaPredicted RBP25.49■■□□□ 1.67
CLIC4-204ENST00000497755 SEPT14Q6ZU15 432 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 SESTD1Q86VW0 696 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 SYTL5Q8TDW5 730 aaPredicted RBP25.49■■□□□ 1.67
CLIC4-204ENST00000497755 KAT2BQ92831 832 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 MAF1Q9H063 256 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 COL20A1Q9P218 1284 aa25.49■■□□□ 1.67
CLIC4-204ENST00000497755 MMP3P08254 477 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 SPRED2Q7Z698 418 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 CAGE1Q8TC20 777 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 AFAP1L1Q8TED9 768 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 ESR2Q92731 530 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 RNF41Q9H4P4 317 aaPredicted RBP25.48■■□□□ 1.67
CLIC4-204ENST00000497755 COG5Q9UP83 839 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 BRWD1Q9NSI6 2320 aa25.48■■□□□ 1.67
CLIC4-204ENST00000497755 NEDD4P46934 1319 aa25.47■■□□□ 1.67
CLIC4-204ENST00000497755 GH1P01241 217 aa25.47■■□□□ 1.67
CLIC4-204ENST00000497755 GRB10Q13322 594 aa25.47■■□□□ 1.67
CLIC4-204ENST00000497755 HDAC1Q13547 482 aaPredicted RBP25.47■■□□□ 1.67
CLIC4-204ENST00000497755 CDC37Q16543 378 aaPredicted RBP25.47■■□□□ 1.67
CLIC4-204ENST00000497755 ADGRF4Q8IZF3 695 aa25.47■■□□□ 1.67
CLIC4-204ENST00000497755 NSUN6Q8TEA1 469 aaKnown RBP25.47■■□□□ 1.67
CLIC4-204ENST00000497755 DHX38Q92620 1227 aaKnown RBP25.47■■□□□ 1.67
CLIC4-204ENST00000497755 PTPRSQ13332 1948 aa25.47■■□□□ 1.67
CLIC4-204ENST00000497755 ABCB11O95342 1321 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 TRIM6-TRIM34B2RNG4 842 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 TLL1O43897 1013 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 LPXNO60711 386 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 CHST3Q7LGC8 479 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 TMCO2Q7Z6W1 182 aaPredicted RBP25.46■■□□□ 1.67
CLIC4-204ENST00000497755 CCDC155Q8N6L0 562 aa25.46■■□□□ 1.67
CLIC4-204ENST00000497755 ANKS1AQ92625 1134 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms