RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 ERVK-24P63145 666 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 KRT85P78386 507 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 LACTBP83111 547 aaPredicted RBP11.21□□□□□ -0.61
TCTN3-206ENST00000497399 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 NONOQ15233 471 aaKnown RBP eCLIP11.21□□□□□ -0.61
TCTN3-206ENST00000497399 INF2Q27J81 1249 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 ATL3Q6DD88 541 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 SLC30A10Q6XR72 485 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
TCTN3-206ENST00000497399 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 CHST13Q8NET6 341 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 TBCKQ8TEA7 893 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 SMCR8Q8TEV9 937 aaPredicted RBP11.21□□□□□ -0.61
TCTN3-206ENST00000497399 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 RTEL1Q9NZ71 1219 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 COL20A1Q9P218 1284 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
TCTN3-206ENST00000497399 FIBPO43427 364 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 SLC25A27O95847 323 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 FOSP01100 380 aaPredicted RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 BCRP11274 1271 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 NCLP19338 710 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 ERCC3P19447 782 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 ATP2B1P20020 1258 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 MCM4P33991 863 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 TRAPPC10P48553 1259 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 RPS6P62753 249 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 PTPAQ15257 358 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 TTC38Q5R3I4 469 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 UBE2Q1Q7Z7E8 422 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 ANKRD13CQ8N6S4 541 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 SYTL5Q8TDW5 730 aaPredicted RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 SH3TC2Q8TF17 1288 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 MAF1Q9H063 256 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 A1CFQ9NQ94 594 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 MAP3K20Q9NYL2 800 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 NOL7Q9UMY1 257 aaKnown RBP11.2□□□□□ -0.62
TCTN3-206ENST00000497399 PLXNA1Q9UIW2 1896 aa11.2□□□□□ -0.62
TCTN3-206ENST00000497399 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 COPB2P35606 906 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 SREBF1P36956 1147 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 BAATQ14032 418 aaPredicted RBP11.19□□□□□ -0.62
TCTN3-206ENST00000497399 MTFR1Q15390 333 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 NEK8Q86SG6 692 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 NCAPG2Q86XI2 1143 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 LINC00301Q8NCQ3 95 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 GPRC5AQ8NFJ5 357 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
TCTN3-206ENST00000497399 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
TCTN3-206ENST00000497399 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 PORCNQ9H237 461 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 CYP39A1Q9NYL5 469 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
TCTN3-206ENST00000497399 LRRC37A2A6NM11 1700 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 FRMPD4Q14CM0 1322 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 YEATS4O95619 227 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 NFKBIBQ15653 356 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 ZNF174Q15697 407 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 C4orf32Q8N8J7 132 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 SPATA32Q96LK8 384 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 SCAND2PQ9GZW5 306 aaPredicted RBP11.18□□□□□ -0.62
TCTN3-206ENST00000497399 MROH8Q9H579 483 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 LMBRD1Q9NUN5 540 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
TCTN3-206ENST00000497399 KIAA1217Q5T5P2 1943 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 ASTN1O14525 1302 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 ELP1O95163 1332 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 ZNF236Q9UL36 1845 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 PRPF40AO75400 957 aaKnown RBP11.17□□□□□ -0.62
TCTN3-206ENST00000497399 TDP2O95551 362 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 CYP3A4P08684 503 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 CIITAP33076 1130 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 USP11P51784 963 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 UBXN2AP68543 259 aa11.17□□□□□ -0.62
TCTN3-206ENST00000497399 CCNA1P78396 465 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms