RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 LOC102724159A0A0B4J2E5 919 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 B4DLN1 442 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 ADAMTS3O15072 1205 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 PWP2Q15269 919 aaKnown RBP24.88■■□□□ 1.57
C9orf3-222ENST00000496567 ARHGEF16Q5VV41 709 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 MCTP1Q6DN14 999 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 KRT25Q7Z3Z0 450 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 RASGRP4Q8TDF6 673 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 MPHOSPH6Q99547 160 aaKnown RBP24.88■■□□□ 1.57
C9orf3-222ENST00000496567 APBA2Q99767 749 aa24.88■■□□□ 1.57
C9orf3-222ENST00000496567 CCDC194A0A1B0GVG4 234 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 FLT3LGP49771 235 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 LBX1P52954 281 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 PRKCZQ05513 592 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 NR5A1Q13285 461 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 ZNF467Q7Z7K2 595 aaPredicted RBP24.87■■□□□ 1.57
C9orf3-222ENST00000496567 PURBQ96QR8 312 aaKnown RBP24.87■■□□□ 1.57
C9orf3-222ENST00000496567 ANO3Q9BYT9 981 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 PXMP2Q9NR77 195 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 GABRQQ9UN88 632 aa24.87■■□□□ 1.57
C9orf3-222ENST00000496567 SOWAHBA6NEL2 793 aa24.86■■□□□ 1.57
C9orf3-222ENST00000496567 XRCC5P13010 732 aaKnown RBP24.86■■□□□ 1.57
C9orf3-222ENST00000496567 CYP2B6P20813 491 aa24.86■■□□□ 1.57
C9orf3-222ENST00000496567 PLXNA1Q9UIW2 1896 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 U2AF2P26368 475 aaKnown RBP eCLIP24.85■■□□□ 1.575e-8■□□□□ 10.7
C9orf3-222ENST00000496567 ALDH5A1P51649 535 aaPredicted RBP24.85■■□□□ 1.57
C9orf3-222ENST00000496567 NONOQ15233 471 aaKnown RBP eCLIP24.85■■□□□ 1.57
C9orf3-222ENST00000496567 OTOP1Q7RTM1 612 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 TNFRSF25Q93038 417 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 IWS1Q96ST2 819 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 MTMR6Q9Y217 621 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 TRIM17Q9Y577 477 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 FRMPD4Q14CM0 1322 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 LCTP09848 1927 aa24.85■■□□□ 1.57
C9orf3-222ENST00000496567 ASB14A6NK59 587 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 EIF2AK2P19525 551 aaKnown RBP24.84■■□□□ 1.57
C9orf3-222ENST00000496567 IRF5Q13568 498 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 NOSTRINQ8IVI9 506 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 MSL3Q8N5Y2 521 aaKnown RBP24.84■■□□□ 1.57
C9orf3-222ENST00000496567 NPLOC4Q8TAT6 608 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 MAML3Q96JK9 1138 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 PGBD1Q96JS3 809 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 RPTORQ8N122 1335 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 PIK3AP1Q6ZUJ8 805 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 TRMT44Q8IYL2 757 aaKnown RBP24.84■■□□□ 1.57
C9orf3-222ENST00000496567 FGD4Q96M96 766 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 PDCD2LQ9BRP1 358 aa24.84■■□□□ 1.57
C9orf3-222ENST00000496567 SREBF1P36956 1147 aa24.83■■□□□ 1.57
C9orf3-222ENST00000496567 PGM5Q15124 567 aa24.83■■□□□ 1.57
C9orf3-222ENST00000496567 RAET1EQ8TD07 263 aa24.83■■□□□ 1.57
C9orf3-222ENST00000496567 ASTN1O14525 1302 aa24.83■■□□□ 1.56
C9orf3-222ENST00000496567 CASP8AP2Q9UKL3 1982 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 NR3C2P08235 984 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 OLFML2BQ68BL8 750 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 XRRA1Q6P2D8 792 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 MAMDC4Q6UXC1 1216 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 TBCKQ8TEA7 893 aa24.82■■□□□ 1.56
C9orf3-222ENST00000496567 KIF28PB7ZC32 967 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 CCND2P30279 289 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 DDIT3P35638 169 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 ARHGAP4P98171 946 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 PCNX4Q63HM2 1172 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 BRAPQ7Z569 592 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 TINF2Q9BSI4 451 aa24.81■■□□□ 1.56
C9orf3-222ENST00000496567 ZSCAN16Q9H4T2 348 aaPredicted RBP24.81■■□□□ 1.56
C9orf3-222ENST00000496567 ZSCAN22P10073 491 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-222ENST00000496567 EDNRBP24530 442 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 UBXN2AP68543 259 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 PDE4DQ08499 809 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 STXBP2Q15833 593 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 MORC4Q8TE76 937 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 SYNGAP1Q96PV0 1343 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 MYCLP12524 364 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-222ENST00000496567 USP11P51784 963 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 NUCB2P80303 420 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 INF2Q27J81 1249 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 EARS2Q5JPH6 523 aaKnown RBP24.8■■□□□ 1.56
C9orf3-222ENST00000496567 CTU1Q7Z7A3 348 aaKnown RBP24.8■■□□□ 1.56
C9orf3-222ENST00000496567 FERMT3Q86UX7 667 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 VSIG10LQ86VR7 867 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 CRYGNQ8WXF5 182 aa24.8■■□□□ 1.56
C9orf3-222ENST00000496567 CIZ1Q9ULV3 898 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-222ENST00000496567 STAM2O75886 525 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 CYP3A4P08684 503 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 PKP1Q13835 747 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 CCL14Q16627 93 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 ARMCX2Q7L311 632 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 NEK8Q86SG6 692 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 PXYLP1Q8TE99 480 aa24.79■■□□□ 1.56
C9orf3-222ENST00000496567 NOL7Q9UMY1 257 aaKnown RBP24.79■■□□□ 1.56
C9orf3-222ENST00000496567 ADCY3O60266 1144 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 BRD1O95696 1058 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 IL31RAQ8NI17 732 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 NAP1L4Q99733 375 aaKnown RBP24.78■■□□□ 1.56
C9orf3-222ENST00000496567 PRDM10Q9NQV6 1147 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 FLRT1Q9NZU1 646 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 PTPN22Q9Y2R2 807 aa24.78■■□□□ 1.56
C9orf3-222ENST00000496567 FAM205CA6NFA0 338 aa24.77■■□□□ 1.56
C9orf3-222ENST00000496567 EIF3JO75822 258 aaKnown RBP24.77■■□□□ 1.56
C9orf3-222ENST00000496567 ZNF76P36508 570 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms