RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 SAFB2Q14151 953 aaKnown RBP eCLIP3.03□□□□□ -1.92
MDC1-208ENST00000494654 KCNB1Q14721 858 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 LBRQ14739 615 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 IFI16Q16666 785 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 LRRC23Q53EV4 343 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 RRP12Q5JTH9 1297 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 SPECC1Q5M775 1068 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZNF569Q5MCW4 686 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 FAM182BQ5T319 152 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ACBD5Q5T8D3 534 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 CCDC181Q5TID7 509 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ALS2CLQ60I27 953 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CREB3L3Q68CJ9 461 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 MSL1Q68DK7 614 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 OLFM4Q6UX06 510 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 RAD9BQ6WBX8 426 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 RINLQ6ZS11 566 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CACNA2D4Q7Z3S7 1137 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 LCA5Q86VQ0 697 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CNGA4Q8IV77 575 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 MMGT1Q8N4V1 131 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GBP7Q8N8V2 638 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 NECAB1Q8N987 351 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 TRIML1Q8N9V2 468 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 C8orf58Q8NAV2 365 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 NSUN7Q8NE18 718 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 CFAP61Q8NHU2 1237 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 SSH3Q8TE77 659 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 NSMCE1Q8WV22 266 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 LZICQ8WZA0 190 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 GPKOWQ92917 476 aaPredicted RBP eCLIP3.03□□□□□ -1.92
MDC1-208ENST00000494654 CYFIP2Q96F07 1278 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 NGLY1Q96IV0 654 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 RBM41Q96IZ5 413 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 CCDC114Q96M63 670 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZNF570Q96NI8 536 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 UCN2Q96RP3 112 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 TSPAN18Q96SJ8 248 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CDC5LQ99459 802 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 DESI2Q9BSY9 194 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 NUP58Q9BVL2 599 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 OSBPL1AQ9BXW6 950 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 YIPF3Q9GZM5 350 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 EHD4Q9H223 541 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 RANBP17Q9H2T7 1088 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 SLC12A5Q9H2X9 1139 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 MMADHCQ9H3L0 296 aaPredicted RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 NDST4Q9H3R1 872 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CENPHQ9H3R5 247 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZSWIM4Q9H7M6 989 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CYLDQ9NQC7 956 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 SLC5A4Q9NY91 659 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.03□□□□□ -1.92
MDC1-208ENST00000494654 ZFATQ9P243 1243 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 CEP126Q9P2H0 1117 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 TFIP11Q9UBB9 837 aaKnown RBP3.03□□□□□ -1.92
MDC1-208ENST00000494654 SLC12A4Q9UP95 1085 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 PHF24Q9UPV7 400 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 ASB3Q9Y575 518 aa3.03□□□□□ -1.92
MDC1-208ENST00000494654 C1orf167Q5SNV9 1468 aa3.03□□□□□ -1.93
MDC1-208ENST00000494654 ITGB4P16144 1822 aa3.03□□□□□ -1.93
MDC1-208ENST00000494654 MROH7Q68CQ1 1323 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 SYNRGQ9UMZ2 1314 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 A0A087WWV3 80 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PNMA6EA0A0J9YXQ4 647 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PTPDC1A2A3K4 754 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 LRRD1A4D1F6 860 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 SOWAHDA6NJG2 315 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 RASSF10A6NK89 507 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ENO4A6NNW6 628 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 E7ENQ6 273 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CAPN5O15484 640 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 PRC1O43663 620 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CREB3O43889 395 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PPP1R12BO60237 982 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 JAK2O60674 1132 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ALDH1L1O75891 902 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ECEL1O95672 775 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 BAG3O95817 575 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 SSBP05455 408 aaKnown RBP eCLIP3.02□□□□□ -1.93
MDC1-208ENST00000494654 PFKFB1P16118 471 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 DESP17661 470 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ATP4AP20648 1035 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MDH1P40925 334 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 RANBP1P43487 201 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PSMC4P43686 418 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 ME1P48163 572 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CTCFP49711 727 aaPredicted RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 GNAQP50148 359 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 CCNG1P51959 295 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 NDUFA8P51970 172 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 NLRP5P59047 1200 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 PTH1RQ03431 593 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 GOLGA8FQ08AF8 430 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 GOLGA8DPQ0D2H9 430 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MTX1Q13505 466 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 BYSLQ13895 437 aaKnown RBP3.02□□□□□ -1.93
MDC1-208ENST00000494654 ITIH4Q14624 930 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 RASA3Q14644 834 aa3.02□□□□□ -1.93
MDC1-208ENST00000494654 MTF1Q14872 753 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms