RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
SCRN1-209ENST00000494620 REC8O95072 547 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 NR3C2P08235 984 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 EDNRBP24530 442 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 ANTXR2P58335 489 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 CXCL17Q6UXB2 119 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 SEPT14Q6ZU15 432 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 DHX32Q7L7V1 743 aaKnown RBP12.74□□□□□ -0.37
SCRN1-209ENST00000494620 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 BADQ92934 168 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 LY9Q9HBG7 655 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 PDLIM7Q9NR12 457 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 TAF6LQ9Y6J9 622 aa12.74□□□□□ -0.37
SCRN1-209ENST00000494620 ASTN1O14525 1302 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 ADCY6O43306 1168 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 GH1P01241 217 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 MYL3P08590 195 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
SCRN1-209ENST00000494620 CDK7P50613 346 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 MTG1Q9BT17 334 aaPredicted RBP12.73□□□□□ -0.37
SCRN1-209ENST00000494620 SPZ1Q9BXG8 430 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
SCRN1-209ENST00000494620 PLXNA1Q9UIW2 1896 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
SCRN1-209ENST00000494620 CASTP20810 708 aaKnown RBP12.72□□□□□ -0.37
SCRN1-209ENST00000494620 PSMA5P28066 241 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 HSD17B4P51659 736 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 TMEM199Q8N511 208 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 SMARCC2Q8TAQ2 1214 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
SCRN1-209ENST00000494620 PXMP2Q9NR77 195 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 RBM28Q9NW13 759 aaKnown RBP12.72□□□□□ -0.37
SCRN1-209ENST00000494620 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
SCRN1-209ENST00000494620 BRCA2P51587 3418 aa12.72□□□□□ -0.37
SCRN1-209ENST00000494620 CTAGE5O15320 804 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 CYTH3O43739 400 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 TIMP1P01033 207 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 CCND2P30279 289 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 HOXA13P31271 388 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-209ENST00000494620 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-209ENST00000494620 FPGSQ05932 587 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 SGMS1Q86VZ5 419 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
SCRN1-209ENST00000494620 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-209ENST00000494620 CCDC196A0A1B0GTZ2 297 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 A6NJR5 290 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
SCRN1-209ENST00000494620 STAM2O75886 525 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 TGFB3P10600 412 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 GHRHRQ02643 423 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCRN1-209ENST00000494620 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 FAM47CQ5HY64 1035 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 DHX37Q8IY37 1157 aaKnown RBP12.7□□□□□ -0.38
SCRN1-209ENST00000494620 PDCD2LQ9BRP1 358 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 LRRC2Q9BYS8 371 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 NOD1Q9Y239 953 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
SCRN1-209ENST00000494620 ZBTB43O43298 467 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 EPB41L2O43491 1005 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 PPP1R11O60927 126 aaPredicted RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 CHMP4BP1P59074 171 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 PURAQ00577 322 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 PGM5Q15124 567 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 DGKDQ16760 1214 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 RTN1Q16799 776 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 BLOC1S2Q6QNY1 142 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 RPUSD2Q8IZ73 545 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 MTIF3Q9H2K0 278 aaKnown RBP12.69□□□□□ -0.38
SCRN1-209ENST00000494620 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
SCRN1-209ENST00000494620 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms