RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 ZNF236Q9UL36 1845 aa5.95□□□□□ -1.46
CTNNA3-204ENST00000494580 RBBP6Q7Z6E9 1792 aaKnown RBP5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 TSPY2A6NKD2 308 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 SOBPA7XYQ1 873 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 GOLGA8HP0CJ92 632 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 PDHBP11177 359 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 RXRAP19793 462 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 HOXA7P31268 230 aaPredicted RBP5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 LACTBP83111 547 aaPredicted RBP5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 PRKCZQ05513 592 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L2Q6R6M4 530 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 CATSPERGQ6ZRH7 1159 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 OTOP1Q7RTM1 612 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 AMOTL1Q8IY63 956 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 PAGR1Q9BTK6 254 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 TANGO6Q9C0B7 1094 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 MCOLN1Q9GZU1 580 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 EFCC1Q9HA90 598 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 CABP5Q9NP86 173 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 RAB6BQ9NRW1 208 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 RBPJLQ9UBG7 517 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 CLIP2Q9UDT6 1046 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 GABRQQ9UN88 632 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 STX8Q9UNK0 236 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 PTCH2Q9Y6C5 1203 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 FRMPD3Q5JV73 1810 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 ZNF536O15090 1300 aa5.94□□□□□ -1.46
CTNNA3-204ENST00000494580 DNAH12Q6ZR08 3092 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 F5H6K3 240 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SH2B2O14492 632 aaPredicted RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 ZNF213O14771 459 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 FKTNO75072 461 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 FLOT1O75955 427 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 STAU1O95793 577 aaKnown RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 TTLL1O95922 423 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SNHG28P0DPA3 235 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 RFX1P22670 979 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PTGS1P23219 599 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 MCCP23508 829 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SLC16A2P36021 539 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 MFAP1P55081 439 aaKnown RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 ERVK-24P63145 666 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 IRX3P78415 501 aaPredicted RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PDE4BQ07343 736 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 KLRC3Q07444 240 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 TMEM132BQ14DG7 1078 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 IMMTQ16891 758 aaKnown RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SLFN13Q68D06 897 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 MFSD6Q6ZSS7 791 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 FASTKD5Q7L8L6 764 aaKnown RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 NBPF11Q86T75 865 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 TICAM2Q86XR7 235 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 STAG2Q8N3U4 1231 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SMCR8Q8TEV9 937 aaPredicted RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 KCNB2Q92953 911 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 CCDC17Q96LX7 622 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 FGD4Q96M96 766 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 KANSL2Q9H9L4 492 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 LY9Q9HBG7 655 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 ZFYVE28Q9HCC9 887 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PRDM10Q9NQV6 1147 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 GINM1Q9NU53 330 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 TMOD4Q9NZQ9 345 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 NYAP2Q9P242 653 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 MORF4L1Q9UBU8 362 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 ZNF214Q9UL59 606 aaPredicted RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PPP1R9AQ9ULJ8 1098 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 RIPK3Q9Y572 518 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 TRIM17Q9Y577 477 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PCDHGA11Q9Y5H2 935 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 MAFBQ9Y5Q3 323 aaPredicted RBP5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 SNX14Q9Y5W7 946 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 ASTN1O14525 1302 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 CDH23Q9H251 3354 aa5.93□□□□□ -1.46
CTNNA3-204ENST00000494580 PLXNA1Q9UIW2 1896 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L15C9J2P7 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 C19orf81C9J6K1 198 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L13C9JLJ4 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L11C9JVI0 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L18D6R9N7 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L22D6RA61 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L17D6RBQ6 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L19D6RCP7 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L20D6RJB6 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 WDR46O15213 610 aaKnown RBP5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 CYTH3O43739 400 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 PPP1R11O60927 126 aaPredicted RBP5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 PLEKHA8P1O95397 391 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 HSPA4P34932 840 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 RNF144AP50876 292 aaPredicted RBP5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 GDF10P55107 478 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 SP3Q02447 781 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 CENPCQ03188 943 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 USP17L24Q0WX57 530 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 ST3GAL1Q11201 340 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 CLN3Q13286 438 aa5.92□□□□□ -1.46
CTNNA3-204ENST00000494580 CCL14Q16627 93 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms