RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ZDHHC13Q8IUH4 622 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 SMC1BQ8NDV3 1235 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 NPLOC4Q8TAT6 608 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.52□□□□□ -1.53
CMSS1-207ENST00000494412 SHKBP1Q8TBC3 707 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 COPS5Q92905 334 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 ZFYVE21Q9BQ24 234 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 ORAI3Q9BRQ5 295 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 DUSP23Q9BVJ7 150 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 PRDM5Q9NQX1 630 aaPredicted RBP5.52□□□□□ -1.53
CMSS1-207ENST00000494412 C1GALT1Q9NS00 363 aa5.52□□□□□ -1.53
CMSS1-207ENST00000494412 THG1LQ9NWX6 298 aaKnown RBP5.52□□□□□ -1.53
CMSS1-207ENST00000494412 TMEFF2Q9UIK5 374 aaPredicted RBP5.52□□□□□ -1.53
CMSS1-207ENST00000494412 SHISA3A0PJX4 238 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 FAM170BA6NMN3 283 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 ARVCFO00192 962 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 MSCO60682 206 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 LEFTY1O75610 366 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 TGFB1P01137 390 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 LTBRP36941 435 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 NOP2P46087 812 aaKnown RBP5.51□□□□□ -1.53
CMSS1-207ENST00000494412 SEPHS1P49903 392 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 DSG1Q02413 1049 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 MLC1Q15049 377 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 PPP4R4Q6NUP7 873 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 HDGFL2Q7Z4V5 671 aaPredicted RBP5.51□□□□□ -1.53
CMSS1-207ENST00000494412 KSR1Q8IVT5 923 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 TTC8Q8TAM2 541 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 GATA6Q92908 595 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 COX4I2Q96KJ9 171 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 TBC1D32Q96NH3 1257 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 RPS6KC1Q96S38 1066 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 LUC7LQ9NQ29 371 aaKnown RBP5.51□□□□□ -1.53
CMSS1-207ENST00000494412 GPR27Q9NS67 375 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 CLEC1BQ9P126 229 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 SPEF1Q9Y4P9 236 aa5.51□□□□□ -1.53
CMSS1-207ENST00000494412 MYL1P05976 194 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 CT47B1P0C2W7 299 aaPredicted RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 FAM87AP0C7U9 286 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 MYBL2P10244 700 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 LCP1P13796 627 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 PLS3P13797 630 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 KIR3DL1P43629 444 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 LSSP48449 732 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 DNM2P50570 870 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 PAK1Q13153 545 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 KCNAB2Q13303 367 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 UBE4AQ14139 1066 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 E4F1Q66K89 784 aaPredicted RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 SLC4A10Q6U841 1118 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 ZAR1Q86SH2 424 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 C11orf74Q86VG3 221 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 CCDC103Q8IW40 242 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 TCEAL8Q8IYN2 117 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 CHST14Q8NCH0 376 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 GIMAP7Q8NHV1 300 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 ZNF526Q8TF50 670 aaPredicted RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 CHTF18Q8WVB6 975 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 JPH3Q8WXH2 748 aaPredicted RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 DIO2Q92813 273 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 FCRL3Q96P31 734 aaPredicted RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 HDAC8Q9BY41 377 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 IP6K2Q9UHH9 426 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 LUC7L2Q9Y383 392 aaKnown RBP5.5□□□□□ -1.53
CMSS1-207ENST00000494412 NPFFR2Q9Y5X5 522 aa5.5□□□□□ -1.53
CMSS1-207ENST00000494412 GOLGA6CA6NDK9 693 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 GOLGA6BA6NDN3 693 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 PRR19A6NJB7 356 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 ARNTLO00327 626 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 TRAF5O00463 557 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 GSC2O15499 205 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 PRPF3O43395 683 aaKnown RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 MED26O95402 600 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 MT-CO1P00395 513 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 CKMP06732 381 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 GOLGA6DP0CG33 693 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 ZSCAN20P17040 1043 aaPredicted RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 CCND1P24385 295 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 SSTR4P31391 388 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 IARSP41252 1262 aaKnown RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 OCRLQ01968 901 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 TMEM177Q53S58 311 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 KSR2Q6VAB6 950 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 LBX2Q6XYB7 198 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 CISD2Q8N5K1 135 aaKnown RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 RHOBTB2Q9BYZ6 727 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 CELF4Q9BZC1 486 aaKnown RBP5.49□□□□□ -1.53
CMSS1-207ENST00000494412 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 EMC7Q9NPA0 242 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 SPTLC3Q9NUV7 552 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 GOLGA6AQ9NYA3 693 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 B4GALT6Q9UBX8 382 aa5.49□□□□□ -1.53
CMSS1-207ENST00000494412 CCDC66A2RUB6 948 aa5.48□□□□□ -1.53
CMSS1-207ENST00000494412 PRR33A8MZF0 331 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms