RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	BARHL2	Q9NY43	387 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	DDX20	Q9UHI6	824 aa	Known RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	LIMCH1	Q9UPQ0	1083 aa		11.5	□□□□□ -0.57
MACF1-222	ENST00000494012	POTEF	A5A3E0	1075 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	DEXI	O95424	95 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	TFRC	P02786	760 aa	Known RBP	11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	RARB	P10826	455 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	EDNRB	P24530	442 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	HOXA13	P31271	388 aa	Predicted RBP	11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	ADCY7	P51828	1080 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	SSRP1	Q08945	709 aa	Known RBP	11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	SCRN1	Q12765	414 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	PRAMEF19	Q5SWL8	479 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	ANKLE1	Q8NAG6	615 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	TRPV1	Q8NER1	839 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	CCDC148	Q8NFR7	591 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	TBC1D5	Q92609	795 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	GTF3C6	Q969F1	213 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	PURB	Q96QR8	312 aa	Known RBP	11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	SLC26A6	Q9BXS9	759 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	CRISPLD2	Q9H0B8	497 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	PXMP2	Q9NR77	195 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	COL20A1	Q9P218	1284 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	FAM184B	Q9ULE4	1060 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	STK36	Q9NRP7	1315 aa		11.49	□□□□□ -0.57
MACF1-222	ENST00000494012	SPDYE3	A6NKU9	549 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	STXBP3	O00186	592 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	EIF2AK2	P19525	551 aa	Known RBP	11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	STXBP2	Q15833	593 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	ME3	Q16798	604 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	CCDC144B	Q3MJ40	725 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	LHX8	Q68G74	356 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	FCHSD1	Q86WN1	690 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	FAM177A1	Q8N128	213 aa	Predicted RBP	11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	SHISA4	Q96DD7	197 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	TAAR1	Q96RJ0	339 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	KATNBL1	Q9H079	304 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	EHMT1	Q9H9B1	1298 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	RIC8A	Q9NPQ8	531 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	OGDHL	Q9ULD0	1010 aa		11.48	□□□□□ -0.57
MACF1-222	ENST00000494012	BRCA2	P51587	3418 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	FRMPD4	Q14CM0	1322 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	ESYT2	A0FGR8	921 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	MEIS2	O14770	477 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	XBP1	P17861	261 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	EN2	P19622	333 aa	Predicted RBP	11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	GNA11	P29992	359 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	PKN1	Q16512	942 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	MCTP2	Q6DN12	878 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	USP17L6P	Q6QN14	398 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	EEPD1	Q7L9B9	569 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	FBXO16	Q8IX29	292 aa	Predicted RBP	11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	ARRDC4	Q8NCT1	418 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	BICD2	Q8TD16	824 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	WASF1	Q92558	559 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	PDCD2L	Q9BRP1	358 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	C6orf50	Q9HD87	102 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	XPNPEP3	Q9NQH7	507 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	SH3GLB2	Q9NR46	395 aa		11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.47	□□□□□ -0.57
MACF1-222	ENST00000494012	SMCO2	A6NFE2	343 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	DUSP11	O75319	330 aa	Known RBP	11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	EIF3J	O75822	258 aa	Known RBP	11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	STAM2	O75886	525 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	FARP2	O94887	1054 aa	Predicted RBP	11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	LARGE1	O95461	756 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	FOS	P01100	380 aa	Predicted RBP	11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	NR3C2	P08235	984 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	CCND2	P30279	289 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	MCM2	P49736	904 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	TNFAIP2	Q03169	654 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	AP3B2	Q13367	1082 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	PGM5	Q15124	567 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	IQSEC1	Q6DN90	963 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	TYW1B	Q6NUM6	668 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	XRRA1	Q6P2D8	792 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	REXO1	Q8N1G1	1221 aa	Known RBP	11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	SCFD2	Q8WU76	684 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	ZMYND12	Q9H0C1	365 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	SPC25	Q9HBM1	224 aa		11.46	□□□□□ -0.57
MACF1-222	ENST00000494012	SYNRG	Q9UMZ2	1314 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	RBM47	A0AV96	593 aa	Known RBP	11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	KBTBD13	C9JR72	458 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	DNM1L	O00429	736 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	PPFIA3	O75145	1194 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	MYCL	P12524	364 aa	Predicted RBP	11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	ADCYAP1R1	P41586	468 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	TTLL4	Q14679	1199 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	UBE2S	Q16763	222 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	GNPTAB	Q3T906	1256 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	PCNX4	Q63HM2	1172 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	TAPT1	Q6NXT6	567 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	RNF180	Q86T96	592 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	VSIG10L	Q86VR7	867 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	NECAB1	Q8N987	351 aa		11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	LLPH	Q9BRT6	129 aa	Known RBP	11.45	□□□□□ -0.58
MACF1-222	ENST00000494012	WDR11	Q9BZH6	1224 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms