RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OTUD7BQ6GQQ9 843 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 C1orf131Q8NDD1 294 aaKnown RBP13.01□□□□□ -0.33
BRCA1-222ENST00000493919 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 RNF186Q9NXI6 227 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 ODF2LQ9ULJ1 636 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-222ENST00000493919 CYP21A2P08686 494 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 FOSL1P15407 271 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 CDR1P51861 262 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-222ENST00000493919 FASTKD5Q7L8L6 764 aaKnown RBP13.01□□□□□ -0.33
BRCA1-222ENST00000493919 SPATA21Q7Z572 469 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 MAP4K1Q92918 833 aa13.01□□□□□ -0.33
BRCA1-222ENST00000493919 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
BRCA1-222ENST00000493919 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 FOXN1O15353 648 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 ORC4O43929 436 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 CCDC159P0C7I6 412 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
BRCA1-222ENST00000493919 MNAT1P51948 309 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 MOGSQ13724 837 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 TREML2Q5T2D2 321 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 GBP6Q6ZN66 633 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
BRCA1-222ENST00000493919 CEP95Q96GE4 821 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
BRCA1-222ENST00000493919 SH2D4AQ9H788 454 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 HOMER3Q9NSC5 361 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 RABL2AQ9UBK7 228 aaPredicted RBP13□□□□□ -0.33
BRCA1-222ENST00000493919 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 STX8Q9UNK0 236 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 MYH4Q9Y623 1939 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 A0A1W2PRG0 241 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 B4E1Z4 1266 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 PDHXO00330 501 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 NMT2O60551 498 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 TBC1D8O95759 1140 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 ALDH1A1P00352 501 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 ATICP31939 592 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 USP14P54578 494 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 PREPLQ4J6C6 727 aaPredicted RBP13□□□□□ -0.33
BRCA1-222ENST00000493919 MYO1HQ8N1T3 1032 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 ESR2Q92731 530 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 PSD3Q9NYI0 1048 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
BRCA1-222ENST00000493919 C19orf81C9J6K1 198 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 CA12O43570 354 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 AP1G2O75843 785 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 MYL1P05976 194 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
BRCA1-222ENST00000493919 IQCB1Q15051 598 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 C4orf46Q504U0 113 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 ZNF662Q6ZS27 426 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 SPICE1Q8N0Z3 855 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 LRRC47Q8N1G4 583 aaKnown RBP12.99□□□□□ -0.33
BRCA1-222ENST00000493919 NEDD1Q8NHV4 660 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 FAM107BQ9H098 131 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 AGTPBP1Q9UPW5 1226 aa12.99□□□□□ -0.33
BRCA1-222ENST00000493919 FGRP09769 529 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 PTK7Q13308 1070 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 CRHR2Q13324 411 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 GPAT2Q6NUI2 795 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 C11orf96Q7Z7L8 435 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 RALYLQ86SE5 291 aaKnown RBP12.98□□□□□ -0.33
BRCA1-222ENST00000493919 DUSP9Q99956 384 aaKnown RBP12.98□□□□□ -0.33
BRCA1-222ENST00000493919 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-222ENST00000493919 CNNM2Q9H8M5 875 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 SAGE1Q9NXZ1 904 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 TTLL1O95922 423 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 CYP2C8P10632 490 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 HOXD10P28358 340 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 RAB27AP51159 221 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 ZNF132P52740 706 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
BRCA1-222ENST00000493919 POSTNQ15063 836 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 SIAH1Q8IUQ4 282 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
BRCA1-222ENST00000493919 KRT23Q9C075 422 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 MTMR4Q9NYA4 1195 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
BRCA1-222ENST00000493919 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 CCDC194A0A1B0GVG4 234 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 MMEP08473 750 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 CORO7P57737 925 aa12.97□□□□□ -0.33
BRCA1-222ENST00000493919 FAM114A1Q8IWE2 563 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms