RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 CCDC85BQ15834 202 aaPredicted RBP20.38■□□□□ 0.85
COL9A1-210ENST00000493682 USH1GQ495M9 461 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 FAM47CQ5HY64 1035 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 DEFB128Q7Z7B8 93 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 DGKHQ86XP1 1220 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 RGS22Q8NE09 1264 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 PPP1R13LQ8WUF5 828 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 ATXN2LQ8WWM7 1075 aaKnown RBP20.38■□□□□ 0.85
COL9A1-210ENST00000493682 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 CPVLQ9H3G5 476 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
COL9A1-210ENST00000493682 B4DLN1 442 aa20.37■□□□□ 0.85
COL9A1-210ENST00000493682 TXNP10599 105 aaKnown RBP20.37■□□□□ 0.85
COL9A1-210ENST00000493682 ATP2A2P16615 1042 aaKnown RBP20.37■□□□□ 0.85
COL9A1-210ENST00000493682 MRPL12P52815 198 aaKnown RBP20.37■□□□□ 0.85
COL9A1-210ENST00000493682 NFRKBQ6P4R8 1299 aa20.37■□□□□ 0.85
COL9A1-210ENST00000493682 THEGQ9P2T0 379 aa20.37■□□□□ 0.85
COL9A1-210ENST00000493682 CHD7Q9P2D1 2997 aa20.37■□□□□ 0.85
COL9A1-210ENST00000493682 SCN10AQ9Y5Y9 1956 aa20.36■□□□□ 0.85
COL9A1-210ENST00000493682 ZNF213O14771 459 aa20.36■□□□□ 0.85
COL9A1-210ENST00000493682 PPP2R2DQ66LE6 453 aa20.36■□□□□ 0.85
COL9A1-210ENST00000493682 ASB2Q96Q27 587 aa20.36■□□□□ 0.85
COL9A1-210ENST00000493682 TTC28Q96AY4 2481 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 ARIH2O95376 493 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 RFC2P35250 354 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 SMC5Q8IY18 1101 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
COL9A1-210ENST00000493682 TNFRSF10AO00220 468 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 PITPNM1O00562 1244 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 KDM4AO75164 1064 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 IQCF3P0C7M6 154 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 NT5C2P49902 561 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 PTPN11Q06124 597 aaPredicted RBP20.34■□□□□ 0.85
COL9A1-210ENST00000493682 CDC37Q16543 378 aaPredicted RBP20.34■□□□□ 0.85
COL9A1-210ENST00000493682 CCDC62Q6P9F0 684 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 IQCA1Q86XH1 822 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 RETREG2Q8NC44 543 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 MYO9BQ13459 2157 aa20.34■□□□□ 0.85
COL9A1-210ENST00000493682 ABCB11O95342 1321 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 SCN5AQ14524 2016 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 ACTN1P12814 892 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 MRPS5P82675 430 aaKnown RBP20.33■□□□□ 0.85
COL9A1-210ENST00000493682 CCDC178Q5BJE1 867 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 CWC27Q6UX04 472 aaKnown RBP20.33■□□□□ 0.85
COL9A1-210ENST00000493682 PLEKHM2Q8IWE5 1019 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 ADGRF4Q8IZF3 695 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 SYTL5Q8TDW5 730 aaPredicted RBP20.33■□□□□ 0.85
COL9A1-210ENST00000493682 ANKS1AQ92625 1134 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 MAF1Q9H063 256 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 KAT14Q9H8E8 782 aa20.33■□□□□ 0.85
COL9A1-210ENST00000493682 B4E1Z4 1266 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 CHMP4BP1P59074 171 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 AAMPQ13685 434 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 TMEM67Q5HYA8 995 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 CHD1LQ86WJ1 897 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 NSUN6Q8TEA1 469 aaKnown RBP20.32■□□□□ 0.84
COL9A1-210ENST00000493682 AFG1LQ8WV93 481 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
COL9A1-210ENST00000493682 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 RWDD1Q9H446 243 aaPredicted RBP20.32■□□□□ 0.84
COL9A1-210ENST00000493682 COL20A1Q9P218 1284 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 NOD1Q9Y239 953 aa20.32■□□□□ 0.84
COL9A1-210ENST00000493682 CA3P07451 260 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 ARHGAP1Q07960 439 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 BFSP2Q13515 415 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 LY6KQ17RY6 165 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 SEPT14Q6ZU15 432 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 ENAHQ8N8S7 591 aaPredicted RBP20.31■□□□□ 0.84
COL9A1-210ENST00000493682 ADAMTS19Q8TE59 1207 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 SLC9A7Q96T83 725 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 FTOQ9C0B1 505 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL9A1-210ENST00000493682 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 ZSWIM5Q9P217 1185 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 LAMA4Q16363 1823 aa20.31■□□□□ 0.84
COL9A1-210ENST00000493682 GH1P01241 217 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 MMP3P08254 477 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 NUCB1Q02818 461 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 PTGISQ16647 500 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 QRICH1Q2TAL8 776 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 MCF2L2Q86YR7 1114 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 MICALL1Q8N3F8 863 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 PHOSPHO2Q8TCD6 241 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 CTAGE1Q96RT6 745 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 IWS1Q96ST2 819 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 RMDN3Q96TC7 470 aa20.3■□□□□ 0.84
COL9A1-210ENST00000493682 TANC1Q9C0D5 1861 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 IGHDP01880 384 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 STXBP2Q15833 593 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 SESTD1Q86VW0 696 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 FBXO11Q86XK2 927 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 KAT2BQ92831 832 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 DSCC1Q9BVC3 393 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 JMJD4Q9H9V9 463 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms