RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 PXMP2Q9NR77 195 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
RHBDF1-211ENST00000493647 RBBP6Q7Z6E9 1792 aaKnown RBP13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 MMP1P03956 469 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 GNA11P29992 359 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 GRK4P32298 578 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 SLAIN1Q8ND83 568 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 TRPV1Q8NER1 839 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 DNERQ8NFT8 737 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 SH3TC2Q8TF17 1288 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 TNFRSF25Q93038 417 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 TINF2Q9BSI4 451 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 ANO3Q9BYT9 981 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 GLT8D2Q9H1C3 349 aa13.88□□□□□ -0.19
RHBDF1-211ENST00000493647 EDIL3O43854 480 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 HMGCRP04035 888 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 XBP1P17861 261 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 NR5A1Q13285 461 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 PGM5Q15124 567 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 PKN2Q16513 984 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 EARS2Q5JPH6 523 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 PRAMEF19Q5SWL8 479 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 COL13A1Q5TAT6 717 aaPredicted RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 TRMT44Q8IYL2 757 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
RHBDF1-211ENST00000493647 FAM205CA6NFA0 338 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 ASB14A6NK59 587 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 KIF28PB7ZC32 967 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 FOSP01100 380 aaPredicted RBP13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 INHAP05111 366 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 NR3C2P08235 984 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 TRIM29Q14134 588 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 MAP3K21Q5TCX8 1036 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 CRYGNQ8WXF5 182 aa13.86□□□□□ -0.19
RHBDF1-211ENST00000493647 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 RGS20O76081 388 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 ZNF865P0CJ78 1059 aaPredicted RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 MYCLP12524 364 aaPredicted RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 CYBAP13498 195 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 KRT2P35908 639 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 SREBF1P36956 1147 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 MRPS9P82933 396 aaKnown RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 PDE4DQ08499 809 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 BECN1Q14457 450 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 VSIG10LQ86VR7 867 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 FBXO16Q8IX29 292 aaPredicted RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 KIF3AQ9Y496 699 aa13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
RHBDF1-211ENST00000493647 PLXNA1Q9UIW2 1896 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 CCND2P30279 289 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 CCND3P30281 292 aaPredicted RBP13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 SLC9C1Q4G0N8 1177 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 TMEM63BQ5T3F8 832 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 KRT25Q7Z3Z0 450 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
RHBDF1-211ENST00000493647 HTTP42858 3142 aa13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 ADCY6O43306 1168 aa13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 SYT1P21579 422 aa13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 ACVR2BQ13705 512 aa13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 MTFR1Q15390 333 aa13.83□□□□□ -0.2
RHBDF1-211ENST00000493647 STXBP2Q15833 593 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms