RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 KPNA6O60684 536 aa25.26■■□□□ 1.63
PFDN4-205ENST00000493356 SKIV2LQ15477 1246 aaKnown RBP25.26■■□□□ 1.63
PFDN4-205ENST00000493356 AAK1Q2M2I8 961 aa25.26■■□□□ 1.63
PFDN4-205ENST00000493356 PHOSPHO2Q8TCD6 241 aa25.26■■□□□ 1.63
PFDN4-205ENST00000493356 COPS5Q92905 334 aa25.26■■□□□ 1.63
PFDN4-205ENST00000493356 MPHOSPH6Q99547 160 aaKnown RBP25.26■■□□□ 1.63
PFDN4-205ENST00000493356 EPOPA6NHQ4 379 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 GTPBP6O43824 516 aaPredicted RBP25.25■■□□□ 1.63
PFDN4-205ENST00000493356 FGAP02671 866 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 KCNQ1P51787 676 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 PTPN11Q06124 597 aaPredicted RBP25.25■■□□□ 1.63
PFDN4-205ENST00000493356 RETREG2Q8NC44 543 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 DNERQ8NFT8 737 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 EVI5LQ96CN4 794 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 HELLSQ9NRZ9 838 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 WDR19Q8NEZ3 1342 aa25.25■■□□□ 1.63
PFDN4-205ENST00000493356 ARHGEF15O94989 841 aa25.24■■□□□ 1.63
PFDN4-205ENST00000493356 TAP1Q03518 808 aa25.24■■□□□ 1.63
PFDN4-205ENST00000493356 ZNF543Q08ER8 600 aa25.24■■□□□ 1.63
PFDN4-205ENST00000493356 FTOQ9C0B1 505 aaKnown RBP eCLIP25.24■■□□□ 1.63
PFDN4-205ENST00000493356 TRIP12Q14669 1992 aaPredicted RBP25.24■■□□□ 1.63
PFDN4-205ENST00000493356 TXNP10599 105 aaKnown RBP25.23■■□□□ 1.63
PFDN4-205ENST00000493356 BFSP2Q13515 415 aa25.23■■□□□ 1.63
PFDN4-205ENST00000493356 HERC6Q8IVU3 1022 aa25.23■■□□□ 1.63
PFDN4-205ENST00000493356 PTPRSQ13332 1948 aa25.23■■□□□ 1.63
PFDN4-205ENST00000493356 ARIH2O95376 493 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 SNHG28P0DPA3 235 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 KRT40Q6A162 431 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 ARNTL2Q8WYA1 636 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 FAM227BQ96M60 508 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 NOD1Q9Y239 953 aa25.22■■□□□ 1.63
PFDN4-205ENST00000493356 ZMYM6O95789 1325 aa25.21■■□□□ 1.63
PFDN4-205ENST00000493356 A0A0D9SFI3 127 aa25.21■■□□□ 1.63
PFDN4-205ENST00000493356 TTC14Q96N46 770 aa25.21■■□□□ 1.63
PFDN4-205ENST00000493356 B4DLN1 442 aa25.2■■□□□ 1.62
PFDN4-205ENST00000493356 KIF28PB7ZC32 967 aa25.2■■□□□ 1.62
PFDN4-205ENST00000493356 BAIAP3O94812 1187 aa25.2■■□□□ 1.62
PFDN4-205ENST00000493356 HSPD1P10809 573 aaKnown RBP25.2■■□□□ 1.62
PFDN4-205ENST00000493356 MRPL12P52815 198 aaKnown RBP25.2■■□□□ 1.62
PFDN4-205ENST00000493356 HAND2P61296 217 aa25.2■■□□□ 1.62
PFDN4-205ENST00000493356 MCMDC2Q4G0Z9 681 aa25.2■■□□□ 1.62
PFDN4-205ENST00000493356 CHMP4BP1P59074 171 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 PTGISQ16647 500 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 USH1GQ495M9 461 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 CCDC62Q6P9F0 684 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 RGS22Q8NE09 1264 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 C1QTNF1Q9BXJ1 281 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 COG5Q9UP83 839 aa25.19■■□□□ 1.62
PFDN4-205ENST00000493356 COL4A4P53420 1690 aaPredicted RBP25.19■■□□□ 1.62
PFDN4-205ENST00000493356 PDE1AP54750 535 aa25.18■■□□□ 1.62
PFDN4-205ENST00000493356 ANKRD45Q5TZF3 282 aa25.18■■□□□ 1.62
PFDN4-205ENST00000493356 ZNF589Q86UQ0 364 aaPredicted RBP25.18■■□□□ 1.62
PFDN4-205ENST00000493356 AFG1LQ8WV93 481 aa25.18■■□□□ 1.62
PFDN4-205ENST00000493356 CTAGE1Q96RT6 745 aa25.18■■□□□ 1.62
PFDN4-205ENST00000493356 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
PFDN4-205ENST00000493356 PCP11498 1178 aaKnown RBP25.17■■□□□ 1.62
PFDN4-205ENST00000493356 PLA2G5P39877 138 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 GRB10Q13322 594 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 GPATCH4Q5T3I0 446 aaKnown RBP25.17■■□□□ 1.62
PFDN4-205ENST00000493356 MFSD6Q6ZSS7 791 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 SPRED2Q7Z698 418 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 SESTD1Q86VW0 696 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 CCDC155Q8N6L0 562 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 CAGE1Q8TC20 777 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 AFAP1L1Q8TED9 768 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 CPVLQ9H3G5 476 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 KIAA1217Q5T5P2 1943 aa25.17■■□□□ 1.62
PFDN4-205ENST00000493356 TLL1O43897 1013 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 LPXNO60711 386 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 MMP3P08254 477 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 GOLGA8HP0CJ92 632 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 KCNJ6P48051 423 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 GPNMBQ14956 572 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 GDF6Q6KF10 455 aaPredicted RBP25.16■■□□□ 1.62
PFDN4-205ENST00000493356 TBC1D10CQ8IV04 446 aa25.16■■□□□ 1.62
PFDN4-205ENST00000493356 BRWD1Q9NSI6 2320 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 GH1P01241 217 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 WDR5P61964 334 aaKnown RBP25.15■■□□□ 1.62
PFDN4-205ENST00000493356 ARHGAP1Q07960 439 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 NMIQ13287 307 aaPredicted RBP25.15■■□□□ 1.62
PFDN4-205ENST00000493356 LY6KQ17RY6 165 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 TICAM2Q86XR7 235 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 TBC1D5Q92609 795 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 KAT2BQ92831 832 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 HLA-CQ95604 372 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 UBA5Q9GZZ9 404 aa25.15■■□□□ 1.62
PFDN4-205ENST00000493356 CCDC171Q6TFL3 1326 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 LCHNA4D1U4 455 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 SEPT14Q6ZU15 432 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 LRRC8DQ7L1W4 858 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 TMCO2Q7Z6W1 182 aaPredicted RBP25.14■■□□□ 1.62
PFDN4-205ENST00000493356 DHX38Q92620 1227 aaKnown RBP25.14■■□□□ 1.62
PFDN4-205ENST00000493356 TAAR1Q96RJ0 339 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 ZKSCAN3Q9BRR0 538 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 MAF1Q9H063 256 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 COL20A1Q9P218 1284 aa25.14■■□□□ 1.62
PFDN4-205ENST00000493356 SELPP16109 830 aa25.13■■□□□ 1.61
PFDN4-205ENST00000493356 RBL2Q08999 1139 aa25.13■■□□□ 1.61
PFDN4-205ENST00000493356 CDC37Q16543 378 aaPredicted RBP25.13■■□□□ 1.61
PFDN4-205ENST00000493356 CHST3Q7LGC8 479 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms