RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 HSD17B4P51659 736 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 NR5A1Q13285 461 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 NPY5RQ15761 445 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 DPP9Q86TI2 863 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 RGS22Q8NE09 1264 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 SYTL5Q8TDW5 730 aaPredicted RBP19.68■□□□□ 0.74
LIME1-208ENST00000493265 GLT8D2Q9H1C3 349 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 COL20A1Q9P218 1284 aa19.68■□□□□ 0.74
LIME1-208ENST00000493265 SPDYE3A6NKU9 549 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 STX6O43752 255 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 UBXN2AP68543 259 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 GRB14Q14449 540 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 GALNT17Q6IS24 598 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 TAAR1Q96RJ0 339 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 PCDHA6Q9UN73 950 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 PCDHA8Q9Y5H6 950 aa19.67■□□□□ 0.74
LIME1-208ENST00000493265 PIK3CDO00329 1044 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 COBLO75128 1261 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 CCL5P13501 91 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 CYP2B6P20813 491 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 PRKCZQ05513 592 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 MORN1Q5T089 497 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 ABRAQ8N0Z2 381 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 FAM177A1Q8N128 213 aaPredicted RBP19.66■□□□□ 0.74
LIME1-208ENST00000493265 DAGLBQ8NCG7 672 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 DPF3Q92784 378 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 NUDT12Q9BQG2 462 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 GABRQQ9UN88 632 aa19.66■□□□□ 0.74
LIME1-208ENST00000493265 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 EIF2AK2P19525 551 aaKnown RBP19.65■□□□□ 0.74
LIME1-208ENST00000493265 CLK2P49760 499 aaKnown RBP19.65■□□□□ 0.74
LIME1-208ENST00000493265 MAP2K5Q13163 448 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 PKP1Q13835 747 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 ARHGEF16Q5VV41 709 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 CHRDL2Q6WN34 429 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
LIME1-208ENST00000493265 RMDN3Q96TC7 470 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 MTMR6Q9Y217 621 aa19.65■□□□□ 0.74
LIME1-208ENST00000493265 DDX49Q9Y6V7 483 aaKnown RBP19.65■□□□□ 0.74
LIME1-208ENST00000493265 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 SOWAHBA6NEL2 793 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 FAM205CA6NFA0 338 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 GHRHRQ02643 423 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 SAMD3Q8N6K7 520 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 RNF208Q9H0X6 261 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 MAP3K20Q9NYL2 800 aaKnown RBP19.64■□□□□ 0.73
LIME1-208ENST00000493265 GJD2Q9UKL4 321 aa19.64■□□□□ 0.73
LIME1-208ENST00000493265 ZNFX1Q9P2E3 1918 aaKnown RBP19.63■□□□□ 0.73
LIME1-208ENST00000493265 DNAJC25-GNG10A0A024R161 153 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 FOSP01100 380 aaPredicted RBP19.63■□□□□ 0.73
LIME1-208ENST00000493265 MYCLP12524 364 aaPredicted RBP19.63■□□□□ 0.73
LIME1-208ENST00000493265 RGS2P41220 211 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 FLT3LGP49771 235 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 AP3B2Q13367 1082 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 ZNF792Q3KQV3 632 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 EARS2Q5JPH6 523 aaKnown RBP19.63■□□□□ 0.73
LIME1-208ENST00000493265 KRT25Q7Z3Z0 450 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 NPLOC4Q8TAT6 608 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 ZFP91Q96JP5 570 aaPredicted RBP19.63■□□□□ 0.73
LIME1-208ENST00000493265 EHMT1Q9H9B1 1298 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 PXMP2Q9NR77 195 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 SLC5A4Q9NY91 659 aa19.63■□□□□ 0.73
LIME1-208ENST00000493265 M0R2N6 131 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 GJB1P08034 283 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 ATP2B1P20020 1258 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 GJA8P48165 433 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 NONOQ15233 471 aaKnown RBP eCLIP19.62■□□□□ 0.73
LIME1-208ENST00000493265 INF2Q27J81 1249 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
LIME1-208ENST00000493265 FOXP1Q9H334 677 aaPredicted RBP19.62■□□□□ 0.73
LIME1-208ENST00000493265 ADD3Q9UEY8 706 aaKnown RBP19.62■□□□□ 0.73
LIME1-208ENST00000493265 LCTP09848 1927 aa19.62■□□□□ 0.73
LIME1-208ENST00000493265 ASTN1O14525 1302 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 ZNF236Q9UL36 1845 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 ZSCAN22P10073 491 aaPredicted RBP19.61■□□□□ 0.73
LIME1-208ENST00000493265 ALDH5A1P51649 535 aaPredicted RBP19.61■□□□□ 0.73
LIME1-208ENST00000493265 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 NOSTRINQ8IVI9 506 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 SLAIN1Q8ND83 568 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 IL31RAQ8NI17 732 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 TBCKQ8TEA7 893 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 USP6NLQ92738 828 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 TNFRSF25Q93038 417 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 FGD4Q96M96 766 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 APBA2Q99767 749 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 MAF1Q9H063 256 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 UNC93B1Q9H1C4 597 aa19.61■□□□□ 0.73
LIME1-208ENST00000493265 PLXNA1Q9UIW2 1896 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 ELNP15502 786 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 U2AF2P26368 475 aaKnown RBP eCLIP19.6■□□□□ 0.731e-9■■■■□ 23
LIME1-208ENST00000493265 PDE4DQ08499 809 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 PGM5Q15124 567 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 CCL14Q16627 93 aa19.6■□□□□ 0.73
LIME1-208ENST00000493265 FOXD4L6Q3SYB3 417 aaPredicted RBP19.6■□□□□ 0.73
LIME1-208ENST00000493265 FOXD4L3Q6VB84 417 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms