RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 BEX3Q00994 111 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 LRIT3Q3SXY7 679 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 ARHGEF16Q5VV41 709 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 CREB3L3Q68CJ9 461 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 ZNF654Q8IZM8 581 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 SAMD3Q8N6K7 520 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 PDGFCQ9NRA1 345 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 MAP3K20Q9NYL2 800 aaKnown RBP10.06□□□□□ -0.8
GABRE-211ENST00000491339 SEC63Q9UGP8 760 aaKnown RBP10.06□□□□□ -0.8
GABRE-211ENST00000491339 TANC1Q9C0D5 1861 aa10.06□□□□□ -0.8
GABRE-211ENST00000491339 ARVCFO00192 962 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 GNAQP50148 359 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 ANTXR2P58335 489 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 SYTL5Q8TDW5 730 aaPredicted RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 IWS1Q96ST2 819 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 RMDN3Q96TC7 470 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 MAP3K14Q99558 947 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 GPHNQ9NQX3 736 aaPredicted RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 PCDHA1Q9Y5I3 950 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 TAF6LQ9Y6J9 622 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 SH2B2O14492 632 aaPredicted RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 KIAA0355O15063 1070 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 TROAPQ12815 778 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 STXBP2Q15833 593 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 CXCL17Q6UXB2 119 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 BADQ92934 168 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 MTMR8Q96EF0 704 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 RRP36Q96EU6 259 aaKnown RBP10.05□□□□□ -0.8
GABRE-211ENST00000491339 PIGSQ96S52 555 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
GABRE-211ENST00000491339 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 TXNP10599 105 aaKnown RBP10.04□□□□□ -0.8
GABRE-211ENST00000491339 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
GABRE-211ENST00000491339 HSD17B4P51659 736 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 FPGSQ05932 587 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 KRT32Q14532 448 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 GPR153Q6NV75 609 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 SPZ1Q9BXG8 430 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 RIOX1Q9H6W3 641 aa10.04□□□□□ -0.8
GABRE-211ENST00000491339 TRIM43BA6NCK2 446 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
GABRE-211ENST00000491339 CTAGE5O15320 804 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 KPNA6O60684 536 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 MYL3P08590 195 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 IRX5P78411 483 aaPredicted RBP10.03□□□□□ -0.8
GABRE-211ENST00000491339 GHRHRQ02643 423 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 FAAP100Q0VG06 881 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 NECTIN1Q15223 517 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 CUL5Q93034 780 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 TRIM43Q96BQ3 446 aaPredicted RBP10.03□□□□□ -0.8
GABRE-211ENST00000491339 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 PXMP2Q9NR77 195 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 SLC12A7Q9Y666 1083 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 SOX1O00570 391 aaPredicted RBP10.03□□□□□ -0.8
GABRE-211ENST00000491339 LIFRP42702 1097 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 SEPT14Q6ZU15 432 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 FAM126BQ8IXS8 530 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 TAAR1Q96RJ0 339 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 MTG1Q9BT17 334 aaPredicted RBP10.03□□□□□ -0.8
GABRE-211ENST00000491339 MYL10Q9BUA6 226 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
GABRE-211ENST00000491339 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
GABRE-211ENST00000491339 GH1P01241 217 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 HMGB1P09429 215 aaKnown RBP10.02□□□□□ -0.81
GABRE-211ENST00000491339 SMARCA1P28370 1054 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 CCND2P30279 289 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.813e-8■□□□□ 9.4
GABRE-211ENST00000491339 TMEM199Q8N511 208 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 LRCH3Q96II8 777 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 NEK1Q96PY6 1258 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 TBX21Q9UL17 535 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 MRVI1Q9Y6F6 885 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 EIF3JO75822 258 aaKnown RBP10.02□□□□□ -0.81
GABRE-211ENST00000491339 REC8O95072 547 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 TIMP1P01033 207 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 NR3C2P08235 984 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 CDK7P50613 346 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 FGD1P98174 961 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
GABRE-211ENST00000491339 KCNV1Q6PIU1 500 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 MICU3Q86XE3 530 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 PIBF1Q8WXW3 757 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 TBC1D5Q92609 795 aa10.02□□□□□ -0.81
GABRE-211ENST00000491339 RNPC3Q96LT9 517 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms