RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 TFF2Q03403 129 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 ZNF543Q08ER8 600 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 ALX1Q15699 326 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 RRP12Q5JTH9 1297 aaKnown RBP9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 KRT40Q6A162 431 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 DEFB128Q7Z7B8 93 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 OR6J1Q8NGC5 347 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 MTIF3Q9H2K0 278 aaKnown RBP9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 SLC28A3Q9HAS3 691 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 PCDHA11Q9Y5I1 949 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 SLC4A7Q9Y6M7 1214 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
PCOLCE-209ENST00000490909 CCDC171Q6TFL3 1326 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 RFXAPO00287 272 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 ZEB2O60315 1214 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 FGAP02671 866 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 MYL3P08590 195 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 HSPD1P10809 573 aaKnown RBP9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 CALML3P27482 149 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 KCNQ1P51787 676 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 NMIQ13287 307 aaPredicted RBP9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 GPNMBQ14956 572 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 PPP2R5BQ15173 497 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 TCTN1Q2MV58 587 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 NBPF20Q3BBV1 942 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 PLEKHM2Q8IWE5 1019 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 MICALL1Q8N3F8 863 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 DHX38Q92620 1227 aaKnown RBP9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 UHRF1Q96T88 793 aaPredicted RBP9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 SEZ6LQ9BYH1 1024 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 COL20A1Q9P218 1284 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 C5orf42Q9H799 3197 aa9.92□□□□□ -0.82
PCOLCE-209ENST00000490909 LOC102724159A0A0B4J2E5 919 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 A6NJR5 290 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 PITPNM1O00562 1244 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 PFKMP08237 780 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 GOLGA8HP0CJ92 632 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 COL9A1P20849 921 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 CPT1AP50416 773 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 PWP2Q15269 919 aaKnown RBP9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 USH1GQ495M9 461 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 RNF207Q6ZRF8 634 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 CERS4Q9HA82 394 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 HELLSQ9NRZ9 838 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 TOMM22Q9NS69 142 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 TCP11L1Q9NUJ3 509 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 MTCH2Q9Y6C9 303 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 MUC6Q6W4X9 2439 aa9.91□□□□□ -0.82
PCOLCE-209ENST00000490909 LCHNA4D1U4 455 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 LPXNO60711 386 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 MMP3P08254 477 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 BMP1P13497 986 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 MRPS5P82675 430 aaKnown RBP9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 TAP1Q03518 808 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 ARHGAP1Q07960 439 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 CDC37Q16543 378 aaPredicted RBP9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 MCMDC2Q4G0Z9 681 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 FAM47CQ5HY64 1035 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 NFRKBQ6P4R8 1299 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 CCDC62Q6P9F0 684 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 SCFD2Q8WU76 684 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 TBC1D5Q92609 795 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 KAT2BQ92831 832 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 WNT8BQ93098 351 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
PCOLCE-209ENST00000490909 TRIOO75962 3097 aa9.9□□□□□ -0.83
PCOLCE-209ENST00000490909 OPLAHO14841 1288 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 SUPT20HL2P0C7V6 817 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 TXNP10599 105 aaKnown RBP9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 PDE4AP27815 886 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 DEFB103AP81534 67 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 PDE4DQ08499 809 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 TMEM67Q5HYA8 995 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 HERC6Q8IVU3 1022 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 RPUSD2Q8IZ73 545 aaKnown RBP9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 DNERQ8NFT8 737 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 UBA5Q9GZZ9 404 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 IL25Q9H293 177 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 COL4A6Q14031 1691 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 RALGAPA2Q2PPJ7 1873 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
PCOLCE-209ENST00000490909 RAD50Q92878 1312 aa9.88□□□□□ -0.83
PCOLCE-209ENST00000490909 HIP1O00291 1037 aa9.88□□□□□ -0.83
PCOLCE-209ENST00000490909 NKRFO15226 690 aaKnown RBP eCLIP9.88□□□□□ -0.83
PCOLCE-209ENST00000490909 POU3F3P20264 500 aaPredicted RBP9.88□□□□□ -0.83
PCOLCE-209ENST00000490909 RFC2P35250 354 aa9.88□□□□□ -0.83
PCOLCE-209ENST00000490909 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms