RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 CYP39A1Q9NYL5 469 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 PCDHA6Q9UN73 950 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 PCDHA8Q9Y5H6 950 aa12.49□□□□□ -0.41
VARS2-210ENST00000490699 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 GPR25O00155 361 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 MEIS2O14770 477 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 TAL1P17542 331 aaPredicted RBP12.48□□□□□ -0.41
VARS2-210ENST00000490699 PTPREP23469 700 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
VARS2-210ENST00000490699 ADORA2AP29274 412 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 RGS2P41220 211 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 PSMC4P43686 418 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 LACTBP83111 547 aaPredicted RBP12.48□□□□□ -0.41
VARS2-210ENST00000490699 NR5A1Q13285 461 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
VARS2-210ENST00000490699 XRRA1Q6P2D8 792 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 SLC30A10Q6XR72 485 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 SYTL5Q8TDW5 730 aaPredicted RBP12.48□□□□□ -0.41
VARS2-210ENST00000490699 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
VARS2-210ENST00000490699 ASB14A6NK59 587 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 MARCH6O60337 910 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 PEX10O60683 326 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 BRD1O95696 1058 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 BMP15O95972 392 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 GCFC2P16383 781 aaKnown RBP12.47□□□□□ -0.41
VARS2-210ENST00000490699 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
VARS2-210ENST00000490699 CCND2P30279 289 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
VARS2-210ENST00000490699 PDE4DQ08499 809 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 GRB14Q14449 540 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
VARS2-210ENST00000490699 ATL3Q6DD88 541 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 NEK8Q86SG6 692 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 RASGRP4Q8TDF6 673 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 IWS1Q96ST2 819 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 TMEM260Q9NX78 707 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
VARS2-210ENST00000490699 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 OPLAHO14841 1288 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 STAM2O75886 525 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
VARS2-210ENST00000490699 SREBF1P36956 1147 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 USP11P51784 963 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 RESTQ13127 1097 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
VARS2-210ENST00000490699 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 INF2Q27J81 1249 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 GNPTABQ3T906 1256 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
VARS2-210ENST00000490699 TBCKQ8TEA7 893 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 APBA2Q99767 749 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 TCEAL9Q9UHQ7 104 aa12.46□□□□□ -0.41
VARS2-210ENST00000490699 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
VARS2-210ENST00000490699 MGAMO43451 1857 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 CCNT1O60563 726 aaKnown RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 PGK2P07205 417 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 EIF2AK2P19525 551 aaKnown RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 ATP2B1P20020 1258 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 DDIT3P35638 169 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 ALDH5A1P51649 535 aaPredicted RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 PRMT2P55345 433 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 KRT85P78386 507 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 NPY5RQ15761 445 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 STXBP2Q15833 593 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 LETM2Q2VYF4 491 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
VARS2-210ENST00000490699 TBC1D5Q92609 795 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 PGBD1Q96JS3 809 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 GBP4Q96PP9 640 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 TAAR1Q96RJ0 339 aa12.45□□□□□ -0.42
VARS2-210ENST00000490699 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 M0R2N6 131 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
VARS2-210ENST00000490699 PKP1Q13835 747 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 PGM5Q15124 567 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
VARS2-210ENST00000490699 PCNX4Q63HM2 1172 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 MOXD1Q6UVY6 613 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 DNAJC5GQ8N7S2 189 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 JMYQ8N9B5 988 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 FAM133AQ8N9E0 248 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
VARS2-210ENST00000490699 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms