RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 HOXA13P31271 388 aaPredicted RBP22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 PDE4DQ08499 809 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 SLC9C1Q4G0N8 1177 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 IFFO2Q5TF58 517 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 USP17L6PQ6QN14 398 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 KRT25Q7Z3Z0 450 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 PXMP2Q9NR77 195 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 PTCH2Q9Y6C5 1203 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 RBBP6Q7Z6E9 1792 aaKnown RBP22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 CLK2P49760 499 aaKnown RBP22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 CNTN2Q02246 1040 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 GNL2Q13823 731 aaKnown RBP22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 STXBP2Q15833 593 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 KRT40Q6A162 431 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 NPLOC4Q8TAT6 608 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 MORC4Q8TE76 937 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 TBC1D5Q92609 795 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 AIFM3Q96NN9 605 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 ABHD16BQ9H3Z7 469 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 PCDHA6Q9UN73 950 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 PCDHA8Q9Y5H6 950 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 FRMPD4Q14CM0 1322 aa22.7■■□□□ 1.22
SHROOM3-209ENST00000490690 SOWAHBA6NEL2 793 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 EDNRBP24530 442 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 CCND2P30279 289 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 CAP1Q01518 475 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 LARP1BQ659C4 914 aaKnown RBP22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 TAAR1Q96RJ0 339 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 NAP1L4Q99733 375 aaKnown RBP22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 VTA1Q9NP79 307 aa22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 BIN2Q9UBW5 565 aaPredicted RBP22.69■■□□□ 1.22
SHROOM3-209ENST00000490690 CCDC194A0A1B0GVG4 234 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 UBE2SQ16763 222 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 GNPTABQ3T906 1256 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 ARMCX2Q7L311 632 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 PDCD2LQ9BRP1 358 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 ANO3Q9BYT9 981 aa22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 FOXP1Q9H334 677 aaPredicted RBP22.68■■□□□ 1.22
SHROOM3-209ENST00000490690 RPTORQ8N122 1335 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 EIF3JO75822 258 aaKnown RBP22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 NR3C2P08235 984 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 CAPN2P17655 700 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 SREBF1P36956 1147 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 PGM5Q15124 567 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 PCNX4Q63HM2 1172 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 KCNV1Q6PIU1 500 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 DIS3L2Q8IYB7 885 aaKnown RBP22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 TRIB2Q92519 343 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 COL20A1Q9P218 1284 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 KCNJ14Q9UNX9 436 aa22.67■■□□□ 1.22
SHROOM3-209ENST00000490690 MSCO60682 206 aa22.66■■□□□ 1.22
SHROOM3-209ENST00000490690 EIF2AK2P19525 551 aaKnown RBP22.66■■□□□ 1.22
SHROOM3-209ENST00000490690 NONOQ15233 471 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHROOM3-209ENST00000490690 JAKMIP3Q5VZ66 844 aa22.66■■□□□ 1.22
SHROOM3-209ENST00000490690 CDHR1Q96JP9 859 aa22.66■■□□□ 1.22
SHROOM3-209ENST00000490690 IGHA2P01877 340 aa22.65■■□□□ 1.22
SHROOM3-209ENST00000490690 USP11P51784 963 aa22.65■■□□□ 1.22
SHROOM3-209ENST00000490690 NLRX1Q86UT6 975 aa22.65■■□□□ 1.22
SHROOM3-209ENST00000490690 VSIG10LQ86VR7 867 aa22.65■■□□□ 1.22
SHROOM3-209ENST00000490690 FGD4Q96M96 766 aa22.65■■□□□ 1.22
SHROOM3-209ENST00000490690 M0R2N6 131 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 MAFGO15525 162 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 INHAP05111 366 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 ELNP15502 786 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 CCL14Q16627 93 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 ARMC5Q96C12 935 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 DOCK3Q8IZD9 2030 aa22.64■■□□□ 1.21
SHROOM3-209ENST00000490690 CYP3A4P08684 503 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 PRKAR2AP13861 404 aaKnown RBP22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 ARHGAP4P98171 946 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 NPY5RQ15761 445 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 SCFD2Q8WU76 684 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 MCOLN1Q9GZU1 580 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 FLRT1Q9NZU1 646 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 SMCHD1A6NHR9 2005 aa22.63■■□□□ 1.21
SHROOM3-209ENST00000490690 ZSWIM8A7E2V4 1837 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 TGFB3P10600 412 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 MYCLP12524 364 aaPredicted RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 AKR1A1P14550 325 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 GCFC2P16383 781 aaKnown RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 CYP2C19P33261 490 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 ZNF76P36508 570 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 SETQ01105 290 aaPredicted RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 MOXD1Q6UVY6 613 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 SHISA4Q96DD7 197 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 ZHX1Q9UKY1 873 aaPredicted RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 FAM184BQ9ULE4 1060 aa22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 NOL7Q9UMY1 257 aaKnown RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 ZNFX1Q9P2E3 1918 aaKnown RBP22.62■■□□□ 1.21
SHROOM3-209ENST00000490690 ASTN1O14525 1302 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 BTBD18B2RXH4 712 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 NKRFO15226 690 aaKnown RBP eCLIP22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 SNAI1O95863 264 aaPredicted RBP22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 CYBAP13498 195 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 TRAPPC10P48553 1259 aa22.61■■□□□ 1.21
SHROOM3-209ENST00000490690 FOSBP53539 338 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms