RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 NFRKBQ6P4R8 1299 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 RASGRP2Q7LDG7 609 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 NOC4LQ9BVI4 516 aaKnown RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
TTC28-207ENST00000490475 NEDD4P46934 1319 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
TTC28-207ENST00000490475 A6NJR5 290 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 DHX16O60231 1041 aaKnown RBP12.06□□□□□ -0.48
TTC28-207ENST00000490475 B4GALT4O60513 344 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 TXNP10599 105 aaKnown RBP12.06□□□□□ -0.48
TTC28-207ENST00000490475 ACTN1P12814 892 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 CYP2C18P33260 490 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 STXBP2Q15833 593 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 USH1GQ495M9 461 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
TTC28-207ENST00000490475 FBXO11Q86XK2 927 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 CCDC155Q8N6L0 562 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 MYLIPQ8WY64 445 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 LSG1Q9H089 658 aaKnown RBP12.06□□□□□ -0.48
TTC28-207ENST00000490475 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 U3KPZ7 1027 aaPredicted RBP12.06□□□□□ -0.48
TTC28-207ENST00000490475 TNKSO95271 1327 aa12.06□□□□□ -0.48
TTC28-207ENST00000490475 ERICH2A1L162 156 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 B4E1Z4 1266 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 CDC45O75419 566 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
TTC28-207ENST00000490475 MYL3P08590 195 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 CYP21A2P08686 494 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 BFSP2Q13515 415 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 SART3Q15020 963 aaKnown RBP12.05□□□□□ -0.48
TTC28-207ENST00000490475 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 C16orf59Q7L2K0 433 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 ENAHQ8N8S7 591 aaPredicted RBP12.05□□□□□ -0.48
TTC28-207ENST00000490475 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 PBX4Q9BYU1 374 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 SLC28A3Q9HAS3 691 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 NOD1Q9Y239 953 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
TTC28-207ENST00000490475 KIAA1217Q5T5P2 1943 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 EIF3JO75822 258 aaKnown RBP12.04□□□□□ -0.48
TTC28-207ENST00000490475 GH1P01241 217 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 CASTP20810 708 aaKnown RBP12.04□□□□□ -0.48
TTC28-207ENST00000490475 PSMC6P62333 389 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 ARHGEF16Q5VV41 709 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
TTC28-207ENST00000490475 RMDN3Q96TC7 470 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 KATNAL1Q9BW62 490 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 UBA5Q9GZZ9 404 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 ANO2Q9NQ90 1003 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
TTC28-207ENST00000490475 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
TTC28-207ENST00000490475 ACRP10323 421 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 CCL23P55773 120 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 GRIN2CQ14957 1233 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 DGKDQ16760 1214 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 NBPF20Q3BBV1 942 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 FAM47CQ5HY64 1035 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 CAGE1Q8TC20 777 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
TTC28-207ENST00000490475 PCDHA11Q9Y5I1 949 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 UNC80Q8N2C7 3258 aa12.03□□□□□ -0.48
TTC28-207ENST00000490475 KLRF2D3W0D1 207 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 E7EWF7 191 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 ZBTB5O15062 677 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 TGFB3P10600 412 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 GHRHRQ02643 423 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 STOX1Q6ZVD7 989 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 OTOP2Q7RTS6 562 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 RALYLQ86SE5 291 aaKnown RBP12.02□□□□□ -0.49
TTC28-207ENST00000490475 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
TTC28-207ENST00000490475 SLC9A7Q96T83 725 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 COL25A1Q9BXS0 654 aaPredicted RBP12.02□□□□□ -0.49
TTC28-207ENST00000490475 WNT8AQ9H1J5 351 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
TTC28-207ENST00000490475 JMJD4Q9H9V9 463 aa12.02□□□□□ -0.49
TTC28-207ENST00000490475 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
TTC28-207ENST00000490475 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 CFBP00751 764 aa12.01□□□□□ -0.49
TTC28-207ENST00000490475 NR3C2P08235 984 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms