RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 SCFD2Q8WU76 684 aa26.25■■□□□ 1.79
HOXA9-205ENST00000489695 FAM122AQ96E09 287 aa26.25■■□□□ 1.79
HOXA9-205ENST00000489695 TMEM47Q9BQJ4 181 aa26.25■■□□□ 1.79
HOXA9-205ENST00000489695 PDE4DQ08499 809 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 BFSP2Q13515 415 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 ALX1Q15699 326 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 KRT40Q6A162 431 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 DNERQ8NFT8 737 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 TCP11L1Q9NUJ3 509 aa26.24■■□□□ 1.79
HOXA9-205ENST00000489695 FRMPD2Q68DX3 1309 aaPredicted RBP26.23■■□□□ 1.79
HOXA9-205ENST00000489695 KIF28PB7ZC32 967 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 TLL1O43897 1013 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 BAIAP3O94812 1187 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 RPS6P62753 249 aaKnown RBP26.23■■□□□ 1.79
HOXA9-205ENST00000489695 PPP1R13LQ8WUF5 828 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 ARNTL2Q8WYA1 636 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 MPHOSPH6Q99547 160 aaKnown RBP26.23■■□□□ 1.79
HOXA9-205ENST00000489695 FTOQ9C0B1 505 aaKnown RBP eCLIP26.23■■□□□ 1.79
HOXA9-205ENST00000489695 GPCPD1Q9NPB8 672 aa26.23■■□□□ 1.79
HOXA9-205ENST00000489695 MX1P20591 662 aa26.22■■□□□ 1.79
HOXA9-205ENST00000489695 COPS5Q92905 334 aa26.22■■□□□ 1.79
HOXA9-205ENST00000489695 WDR19Q8NEZ3 1342 aa26.21■■□□□ 1.79
HOXA9-205ENST00000489695 TXNP10599 105 aaKnown RBP26.21■■□□□ 1.79
HOXA9-205ENST00000489695 PDHBP11177 359 aa26.21■■□□□ 1.79
HOXA9-205ENST00000489695 HLA-CQ95604 372 aa26.21■■□□□ 1.79
HOXA9-205ENST00000489695 CRBNQ96SW2 442 aa26.21■■□□□ 1.79
HOXA9-205ENST00000489695 TANC1Q9C0D5 1861 aa26.21■■□□□ 1.79
HOXA9-205ENST00000489695 LPXNO60711 386 aa26.2■■□□□ 1.78
HOXA9-205ENST00000489695 GRB10Q13322 594 aa26.2■■□□□ 1.78
HOXA9-205ENST00000489695 YTHDC1Q96MU7 727 aaKnown RBP26.2■■□□□ 1.78
HOXA9-205ENST00000489695 CTAGE1Q96RT6 745 aa26.2■■□□□ 1.78
HOXA9-205ENST00000489695 ARIH1Q9Y4X5 557 aaPredicted RBP26.2■■□□□ 1.78
HOXA9-205ENST00000489695 SALL3Q9BXA9 1300 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 ARIH2O95376 493 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 ZNF543Q08ER8 600 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 RGS22Q8NE09 1264 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 CAGE1Q8TC20 777 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 EPHX3Q9H6B9 360 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 NOD1Q9Y239 953 aa26.19■■□□□ 1.78
HOXA9-205ENST00000489695 B4DLN1 442 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 FGAP02671 866 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 SNHG28P0DPA3 235 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 MRPL12P52815 198 aaKnown RBP26.18■■□□□ 1.78
HOXA9-205ENST00000489695 GPNMBQ14956 572 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 PTGISQ16647 500 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 CCDC62Q6P9F0 684 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 SESTD1Q86VW0 696 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 AFAP1L1Q8TED9 768 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 TTC14Q96N46 770 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 HELLSQ9NRZ9 838 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 TOMM22Q9NS69 142 aa26.18■■□□□ 1.78
HOXA9-205ENST00000489695 RRP12Q5JTH9 1297 aaKnown RBP26.17■■□□□ 1.78
HOXA9-205ENST00000489695 SPRED2Q7Z698 418 aa26.17■■□□□ 1.78
HOXA9-205ENST00000489695 CCDC155Q8N6L0 562 aa26.17■■□□□ 1.78
HOXA9-205ENST00000489695 LRFN3Q9BTN0 628 aa26.17■■□□□ 1.78
HOXA9-205ENST00000489695 KCNJ6P48051 423 aa26.16■■□□□ 1.78
HOXA9-205ENST00000489695 WDR5P61964 334 aaKnown RBP26.16■■□□□ 1.78
HOXA9-205ENST00000489695 TET1Q8NFU7 2136 aa26.16■■□□□ 1.78
HOXA9-205ENST00000489695 EVI5LQ96CN4 794 aa26.16■■□□□ 1.78
HOXA9-205ENST00000489695 MAF1Q9H063 256 aa26.16■■□□□ 1.78
HOXA9-205ENST00000489695 LMCD1Q9NZU5 365 aa26.16■■□□□ 1.78
HOXA9-205ENST00000489695 HOXD11P31277 338 aaPredicted RBP26.15■■□□□ 1.78
HOXA9-205ENST00000489695 RBL2Q08999 1139 aa26.15■■□□□ 1.78
HOXA9-205ENST00000489695 HDAC1Q13547 482 aaPredicted RBP26.15■■□□□ 1.78
HOXA9-205ENST00000489695 AAMPQ13685 434 aa26.15■■□□□ 1.78
HOXA9-205ENST00000489695 GDF6Q6KF10 455 aaPredicted RBP26.15■■□□□ 1.78
HOXA9-205ENST00000489695 AFG1LQ8WV93 481 aa26.15■■□□□ 1.78
HOXA9-205ENST00000489695 ZMYM6O95789 1325 aa26.14■■□□□ 1.78
HOXA9-205ENST00000489695 LCHNA4D1U4 455 aa26.14■■□□□ 1.78
HOXA9-205ENST00000489695 MMP3P08254 477 aa26.14■■□□□ 1.78
HOXA9-205ENST00000489695 SELPP16109 830 aa26.14■■□□□ 1.78
HOXA9-205ENST00000489695 KAT2BQ92831 832 aa26.14■■□□□ 1.78
HOXA9-205ENST00000489695 PARNO95453 639 aaKnown RBP26.13■■□□□ 1.77
HOXA9-205ENST00000489695 CXCL10P02778 98 aa26.13■■□□□ 1.77
HOXA9-205ENST00000489695 CHMP4BP1P59074 171 aa26.13■■□□□ 1.77
HOXA9-205ENST00000489695 ARHGAP1Q07960 439 aa26.13■■□□□ 1.77
HOXA9-205ENST00000489695 LRRC8DQ7L1W4 858 aa26.13■■□□□ 1.77
HOXA9-205ENST00000489695 DHX38Q92620 1227 aaKnown RBP26.13■■□□□ 1.77
HOXA9-205ENST00000489695 GH1P01241 217 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 HSPD1P10809 573 aaKnown RBP26.12■■□□□ 1.77
HOXA9-205ENST00000489695 PCP11498 1178 aaKnown RBP26.12■■□□□ 1.77
HOXA9-205ENST00000489695 LY6KQ17RY6 165 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 TMEM31Q5JXX7 168 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 GPATCH4Q5T3I0 446 aaKnown RBP26.12■■□□□ 1.77
HOXA9-205ENST00000489695 CNKSR3Q6P9H4 555 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 TMCO2Q7Z6W1 182 aaPredicted RBP26.12■■□□□ 1.77
HOXA9-205ENST00000489695 TICAM2Q86XR7 235 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 FAM227BQ96M60 508 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 PTPRSQ13332 1948 aa26.12■■□□□ 1.77
HOXA9-205ENST00000489695 NBNO60934 754 aa26.11■■□□□ 1.77
HOXA9-205ENST00000489695 DEFB103AP81534 67 aa26.11■■□□□ 1.77
HOXA9-205ENST00000489695 USH1GQ495M9 461 aa26.11■■□□□ 1.77
HOXA9-205ENST00000489695 KHSRPQ92945 711 aaKnown RBP eCLIP26.11■■□□□ 1.77
HOXA9-205ENST00000489695 ZBED2Q9BTP6 218 aa26.11■■□□□ 1.77
HOXA9-205ENST00000489695 HCN4Q9Y3Q4 1203 aa26.11■■□□□ 1.77
HOXA9-205ENST00000489695 COL4A4P53420 1690 aaPredicted RBP26.1■■□□□ 1.77
HOXA9-205ENST00000489695 A0A0D9SFI3 127 aa26.1■■□□□ 1.77
HOXA9-205ENST00000489695 ABHD14A-ACY1A0A1B0GW23 586 aa26.1■■□□□ 1.77
HOXA9-205ENST00000489695 GPR37L1O60883 481 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms