RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 BICD2Q8TD16 824 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 ERCC4Q92889 916 aaPredicted RBP10.97□□□□□ -0.65
NOD1-208ENST00000489614 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 ALG1Q9BT22 464 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 PPP2R3BQ9Y5P8 575 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
NOD1-208ENST00000489614 BTNL9Q6UXG8 535 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 MICAL1Q8TDZ2 1067 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 WASF1Q92558 559 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 BAG1Q99933 345 aaPredicted RBP10.97□□□□□ -0.65
NOD1-208ENST00000489614 PUF60Q9UHX1 559 aaKnown RBP10.97□□□□□ -0.65
NOD1-208ENST00000489614 RCOR1Q9UKL0 485 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 BAZ2BQ9UIF8 2168 aaKnown RBP10.97□□□□□ -0.65
NOD1-208ENST00000489614 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 GRIK3Q13003 919 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 CRYMQ14894 314 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.65
NOD1-208ENST00000489614 ASPRV1Q53RT3 343 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 CMTR1Q8N1G2 835 aaKnown RBP10.96□□□□□ -0.65
NOD1-208ENST00000489614 C8orf76Q96K31 380 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 CSRNP1Q96S65 589 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 FOXP1Q9H334 677 aaPredicted RBP10.96□□□□□ -0.65
NOD1-208ENST00000489614 HACL1Q9UJ83 578 aa10.96□□□□□ -0.65
NOD1-208ENST00000489614 FAM196BA6NMK8 535 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 CHUKO15111 745 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 GNG11P61952 73 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 ARMCX5Q6P1M9 558 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 DCAF4Q8WV16 495 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 SLC26A6Q9BXS9 759 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 ABCB6Q9NP58 842 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.66
NOD1-208ENST00000489614 WDR81Q562E7 1941 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 A0A1B0GUA9 196 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 A0A1W2PRG0 241 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 CCDC151A5D8V7 595 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 USP17L5A8MUK1 530 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 POTECB2RU33 542 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 STXBP3O00186 592 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 PLA2G6O60733 806 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 SSBP05455 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
NOD1-208ENST00000489614 KIF5BP33176 963 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 GNAQP50148 359 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 RWDD2BP57060 319 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 PTPAQ15257 358 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 E2F5Q15329 346 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 SPDL1Q96EA4 605 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 PYGLP06737 847 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 CAP2P40123 477 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 IQCB1Q15051 598 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 RBBP5Q15291 538 aaKnown RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 PTPN21Q16825 1174 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 BEND6Q5SZJ8 279 aaPredicted RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 TRIM65Q6PJ69 517 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 FAM237AA0A1B0GTK4 181 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 CPLX1O14810 134 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 TXLNAP40222 546 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 GOLGA8FQ08AF8 430 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 GOLGA8DPQ0D2H9 430 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 SF3A1Q15459 793 aaKnown RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 NOL9Q5SY16 702 aaKnown RBP10.95□□□□□ -0.66
NOD1-208ENST00000489614 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 WDR24Q96S15 920 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 ZBTB21Q9ULJ3 1066 aa10.95□□□□□ -0.66
NOD1-208ENST00000489614 ESYT2A0FGR8 921 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 PPP1R11O60927 126 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 RNF40O75150 1001 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 RTN2O75298 545 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 SCG2P13521 617 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 GSDMDP57764 484 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 RASA3Q14644 834 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 SEPT2Q15019 361 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 ABCB5Q2M3G0 1257 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 PREPLQ4J6C6 727 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 APOBEC3FQ8IUX4 373 aaKnown RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 AFAP1L1Q8TED9 768 aa10.94□□□□□ -0.66
NOD1-208ENST00000489614 LEO1Q8WVC0 666 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
NOD1-208ENST00000489614 RABGGTAQ92696 567 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms