RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TLK2Q86UE8 772 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 TDHQ8IZJ6 230 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 STAG2Q8N3U4 1231 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 AMNQ9BXJ7 453 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 VAT1LQ9HCJ6 419 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 PDLIM7Q9NR12 457 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 KLF18A0A0U1RQI7 1052 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 ZBTB5O15062 677 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 CTAGE5O15320 804 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 ZEB2O60315 1214 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 SMPD1P17405 629 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 EDNRBP24530 442 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 MDM2Q00987 491 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 TROAPQ12815 778 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 CUL4AQ13619 759 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 MTMR8Q96EF0 704 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 DDX49Q9Y6V7 483 aaKnown RBP12.21□□□□□ -0.45
SCAMP4-208ENST00000489554 LRRC37A2A6NM11 1700 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 MCM3APO60318 1980 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 DCDC2CA8MYV0 355 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 DYNC1LI2O43237 492 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 PFKFB2O60825 505 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 CABYRO75952 493 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 DDAH1O94760 285 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 CLTBP09497 229 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 MCM2P49736 904 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 DUSP28Q4G0W2 176 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 ZNF654Q8IZM8 581 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 WDR11Q9BZH6 1224 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 RIOX1Q9H6W3 641 aa12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
SCAMP4-208ENST00000489554 LCTP09848 1927 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 GOLGA8BA8MQT2 603 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 KIAA0355O15063 1070 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 8.4
SCAMP4-208ENST00000489554 CTDNEP1O95476 244 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 RXRAP19793 462 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 CDC27P30260 824 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 KIF5BP33176 963 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 RCAN1P53805 252 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 BEX3Q00994 111 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 GHRHRQ02643 423 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 SCRN1Q12765 414 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 SLC35G1Q2M3R5 365 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 SAMD3Q8N6K7 520 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 SCFD2Q8WU76 684 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 IWS1Q96ST2 819 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 SEZ6LQ9BYH1 1024 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 NCOA5Q9HCD5 579 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 PCDHA1Q9Y5I3 950 aa12.19□□□□□ -0.46
SCAMP4-208ENST00000489554 TRIM43BA6NCK2 446 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 ARVCFO00192 962 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 DTNBO60941 627 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 CFBP00751 764 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 CDK7P50613 346 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 HSD17B4P51659 736 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 FGD1P98174 961 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 FAAP100Q0VG06 881 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 FUT2Q10981 343 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 STK3Q13188 491 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 NTRK3Q16288 839 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 BRDTQ58F21 947 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 SH3RF1Q7Z6J0 888 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 CTCFLQ8NI51 663 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-208ENST00000489554 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms