RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 DCDC2CA8MYV0 355 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 CFBP00751 764 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 CDK7P50613 346 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 EXOSC10Q01780 885 aaKnown RBP22.01■■□□□ 1.11
MRPL55-230ENST00000489430 TTLL4Q14679 1199 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 PPP2R5BQ15173 497 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 STXBP2Q15833 593 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 SYNE3Q6ZMZ3 975 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 RRP36Q96EU6 259 aaKnown RBP22.01■■□□□ 1.11
MRPL55-230ENST00000489430 PDLIM7Q9NR12 457 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 COL20A1Q9P218 1284 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 MCM3APO60318 1980 aa22.01■■□□□ 1.11
MRPL55-230ENST00000489430 LCTP09848 1927 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 EIF3JO75822 258 aaKnown RBP22■■□□□ 1.11
MRPL55-230ENST00000489430 CLTBP09497 229 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 CPT1AP50416 773 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 BRDTQ58F21 947 aaPredicted RBP22■■□□□ 1.11
MRPL55-230ENST00000489430 ARHGEF16Q5VV41 709 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 RASEFQ8IZ41 740 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 UBE2OQ9C0C9 1292 aaKnown RBP22■■□□□ 1.11
MRPL55-230ENST00000489430 PXMP2Q9NR77 195 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 LRRC37A2A6NM11 1700 aa22■■□□□ 1.11
MRPL55-230ENST00000489430 GCOM1H8Y6P7 765 aaPredicted RBP21.99■■□□□ 1.11
MRPL55-230ENST00000489430 ARVCFO00192 962 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 KIAA0355O15063 1070 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 POLR2MP0CAP2 368 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 HSPA4P34932 840 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 RCAN1P53805 252 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 TDHQ8IZJ6 230 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 FANCBQ8NB91 859 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 MYL10Q9BUA6 226 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 SEC63Q9UGP8 760 aaKnown RBP21.99■■□□□ 1.11
MRPL55-230ENST00000489430 TRIOBPQ9H2D6 2365 aa21.99■■□□□ 1.11
MRPL55-230ENST00000489430 KPNA6O60684 536 aa21.98■■□□□ 1.11
MRPL55-230ENST00000489430 PQBP1O60828 265 aaKnown RBP21.98■■□□□ 1.11
MRPL55-230ENST00000489430 IRX5P78411 483 aaPredicted RBP21.98■■□□□ 1.11
MRPL55-230ENST00000489430 BEX3Q00994 111 aa21.98■■□□□ 1.11
MRPL55-230ENST00000489430 COL9A3Q14050 684 aaPredicted RBP21.98■■□□□ 1.11
MRPL55-230ENST00000489430 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
MRPL55-230ENST00000489430 VTI1AQ96AJ9 217 aa21.98■■□□□ 1.11
MRPL55-230ENST00000489430 POLR3EQ9NVU0 708 aa21.98■■□□□ 1.11
MRPL55-230ENST00000489430 NR3C2P08235 984 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 TXNP10599 105 aaKnown RBP21.97■■□□□ 1.11
MRPL55-230ENST00000489430 MDM2Q00987 491 aaPredicted RBP21.97■■□□□ 1.11
MRPL55-230ENST00000489430 FAAP100Q0VG06 881 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 ADCK5Q3MIX3 580 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 CCDC62Q6P9F0 684 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 APOA5Q6Q788 366 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 TEX2Q8IWB9 1127 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 FBXL16Q8N461 479 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 SRBD1Q8N5C6 995 aaKnown RBP21.97■■□□□ 1.11
MRPL55-230ENST00000489430 PDCD2LQ9BRP1 358 aa21.97■■□□□ 1.11
MRPL55-230ENST00000489430 PRDM5Q9NQX1 630 aaPredicted RBP21.97■■□□□ 1.11
MRPL55-230ENST00000489430 RBM28Q9NW13 759 aaKnown RBP21.97■■□□□ 1.11
MRPL55-230ENST00000489430 TRIM43BA6NCK2 446 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 A6NJR5 290 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 LRIT3Q3SXY7 679 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 TMEM63BQ5T3F8 832 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 KCNV1Q6PIU1 500 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 CXCL17Q6UXB2 119 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 TMTC3Q6ZXV5 915 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 OR6J1Q8NGC5 347 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 TRIM43Q96BQ3 446 aaPredicted RBP21.96■■□□□ 1.11
MRPL55-230ENST00000489430 LRRC2Q9BYS8 371 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 TMEM39AQ9NV64 488 aa21.96■■□□□ 1.11
MRPL55-230ENST00000489430 PIK3CDO00329 1044 aa21.95■■□□□ 1.1
MRPL55-230ENST00000489430 EIF2AK2P19525 551 aaKnown RBP21.95■■□□□ 1.1
MRPL55-230ENST00000489430 VSIG10LQ86VR7 867 aa21.95■■□□□ 1.1
MRPL55-230ENST00000489430 MICU3Q86XE3 530 aa21.95■■□□□ 1.1
MRPL55-230ENST00000489430 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
MRPL55-230ENST00000489430 STAM2O75886 525 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 PLEKHA8P1O95397 391 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 TGFB3P10600 412 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 HOXA13P31271 388 aaPredicted RBP21.94■■□□□ 1.1
MRPL55-230ENST00000489430 ITGA7Q13683 1181 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 GPR153Q6NV75 609 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 SH3RF1Q7Z6J0 888 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 FAM126BQ8IXS8 530 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 EMID1Q96A84 441 aaPredicted RBP21.94■■□□□ 1.1
MRPL55-230ENST00000489430 TBX21Q9UL17 535 aa21.94■■□□□ 1.1
MRPL55-230ENST00000489430 ZBTB43O43298 467 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 GH1P01241 217 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 RAG1P15918 1043 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 RXRAP19793 462 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 PSMA5P28066 241 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 PURAQ00577 322 aaKnown RBP21.93■■□□□ 1.1
MRPL55-230ENST00000489430 FRMPD4Q14CM0 1322 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 PGM5Q15124 567 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 SEPT14Q6ZU15 432 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 CUL5Q93034 780 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 MTG1Q9BT17 334 aaPredicted RBP21.93■■□□□ 1.1
MRPL55-230ENST00000489430 SNX14Q9Y5W7 946 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 LAMA3Q16787 3333 aa21.93■■□□□ 1.1
MRPL55-230ENST00000489430 ARIH2O95376 493 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 CD4P01730 458 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 PTGS1P23219 599 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 CCND2P30279 289 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 XRRA1Q6P2D8 792 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 BLOC1S2Q6QNY1 142 aa21.92■■□□□ 1.1
MRPL55-230ENST00000489430 BADQ92934 168 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms