RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PARD6BQ9BYG5 372 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 MCM8Q9UJA3 840 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 HOOK1Q9UJC3 728 aaKnown RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 GUCA1BQ9UMX6 200 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 DUSP10Q9Y6W6 482 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ANKRD33BA6NCL7 494 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 USP17L10C9JJH3 530 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PARP1P09874 1014 aaKnown RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 RHOXF2BP0C7M4 288 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ZNF18P17022 549 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 USP8P40818 1118 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ASIC1P78348 528 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 STK4Q13043 487 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PSMD2Q13200 908 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ZNF569Q5MCW4 686 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 APTXQ7Z2E3 356 aaKnown RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 SMCR8Q8TEV9 937 aaPredicted RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 BPIFA3Q9BQP9 254 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 RHOXF2Q9BQY4 288 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 TRIM6Q9C030 488 aaPredicted RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 IKZF4Q9H2S9 585 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PCDHA4Q9UN74 947 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 KCNJ18B7U540 433 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 MARCH6O60337 910 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 DDAH1O94760 285 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 PLEKP08567 350 aaPredicted RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 GCFC2P16383 781 aaKnown RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 KCNJ12Q14500 433 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 NR1I3Q14994 352 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 KCNK18Q7Z418 384 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 CDAN1Q8IWY9 1227 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 AMOTL1Q8IY63 956 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 ANKRD13CQ8N6S4 541 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 WDR66Q8TBY9 1149 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
BEST3-205ENST00000488961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
BEST3-205ENST00000488961 AGPAT5Q9NUQ2 364 aa8.51□□□□□ -1.05
BEST3-205ENST00000488961 SCN7AQ01118 1682 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 MEIS1O00470 390 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 CBFA2T2O43439 604 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ORC4O43929 436 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 PPFIA4O75335 1185 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 KIF5BP33176 963 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 NF2P35240 595 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 RHBDL3P58872 404 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ETF1P62495 437 aaKnown RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 ERVK-24P63145 666 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ARID5AQ03989 594 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 SNX1Q13596 522 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 C4orf32Q8N8J7 132 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 MLKLQ8NB16 471 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ZNF483Q8TF39 744 aaPredicted RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 CRACR2AQ9BSW2 395 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 FGFBP2Q9BYJ0 223 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 SMARCAL1Q9NZC9 954 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 CPSF2Q9P2I0 782 aaKnown RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 EFCAB8A8MWE9 144 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 IPO7O95373 1038 aaKnown RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 MYBL2P10244 700 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 ADCY2Q08462 1091 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 PDE4DQ08499 809 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ECM1Q16610 540 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 KRT26Q7Z3Y9 468 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 FMNL3Q8IVF7 1028 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 NELFCDQ8IXH7 590 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 ENOX1Q8TC92 643 aaKnown RBP8.5□□□□□ -1.05
BEST3-205ENST00000488961 SH2D3AQ9BRG2 576 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 IMPACTQ9P2X3 320 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 SBF2Q86WG5 1849 aa8.5□□□□□ -1.05
BEST3-205ENST00000488961 MYH1P12882 1939 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 CLRN2A0PK11 232 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 MMP10P09238 476 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 CALM1P0DP23 149 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 CALM2P0DP24 149 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 CALM3P0DP25 149 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 HOXA13P31271 388 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 KRT9P35527 623 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 PAK1Q13153 545 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 DGKZQ13574 1117 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 SPATA1Q5VX52 437 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 SPTY2D1Q68D10 685 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 CABP7Q86V35 215 aa8.49□□□□□ -1.05
BEST3-205ENST00000488961 ZKSCAN4Q969J2 545 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 ZC3H12CQ9C0D7 883 aaKnown RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 FAM207AQ9NSI2 230 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
BEST3-205ENST00000488961 ADD3Q9UEY8 706 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms