RNA–Protein interactions for RNA: ENST00000488780.6

PCNX2-213, Transcript of pecanex 2, humanhuman

TSL 5 BASIC

Gene PCNX2, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-213ENST00000488780 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
PCNX2-213ENST00000488780 PIGSQ96S52 555 aa13.12□□□□□ -0.31
PCNX2-213ENST00000488780 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
PCNX2-213ENST00000488780 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
PCNX2-213ENST00000488780 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
PCNX2-213ENST00000488780 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
PCNX2-213ENST00000488780 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 ARVCFO00192 962 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
PCNX2-213ENST00000488780 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCNX2-213ENST00000488780 PTGS1P23219 599 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 KIF5BP33176 963 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 SAMD3Q8N6K7 520 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 BADQ92934 168 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
PCNX2-213ENST00000488780 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
PCNX2-213ENST00000488780 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CYTH3O43739 400 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 RAG1P15918 1043 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 LIFRP42702 1097 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CDK7P50613 346 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 STXBP2Q15833 593 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 SLC35G1Q2M3R5 365 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 LRIT3Q3SXY7 679 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 BRDTQ58F21 947 aaPredicted RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 OR6J1Q8NGC5 347 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 MYL10Q9BUA6 226 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CALM1P0DP23 149 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CALM2P0DP24 149 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CALM3P0DP25 149 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 TXNP10599 105 aaKnown RBP13.1□□□□□ -0.31
PCNX2-213ENST00000488780 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 GNAQP50148 359 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 CPT1AP50416 773 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 HSD17B4P51659 736 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 GHRHRQ02643 423 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 SEZ6LQ9BYH1 1024 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
PCNX2-213ENST00000488780 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
PCNX2-213ENST00000488780 OPLAHO14841 1288 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 NR3C2P08235 984 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 POLR2MP0CAP2 368 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
PCNX2-213ENST00000488780 ITGA7Q13683 1181 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 SEPT14Q6ZU15 432 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 RRP36Q96EU6 259 aaKnown RBP13.09□□□□□ -0.31
PCNX2-213ENST00000488780 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
PCNX2-213ENST00000488780 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
PCNX2-213ENST00000488780 MYL3P08590 195 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 ITGB8P26012 769 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
PCNX2-213ENST00000488780 KRT32Q14532 448 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 DNAH12Q6ZR08 3092 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 SLC43A3Q8NBI5 491 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 COPS5Q92905 334 aa13.08□□□□□ -0.32
PCNX2-213ENST00000488780 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
PCNX2-213ENST00000488780 KPNA6O60684 536 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 ARIH2O95376 493 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 TIMP1P01033 207 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 MYCLP12524 364 aaPredicted RBP13.07□□□□□ -0.32
PCNX2-213ENST00000488780 RXRAP19793 462 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
PCNX2-213ENST00000488780 PSMC6P62333 389 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 DHX32Q7L7V1 743 aaKnown RBP13.07□□□□□ -0.32
PCNX2-213ENST00000488780 PDCD2LQ9BRP1 358 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
PCNX2-213ENST00000488780 A6NJR5 290 aa13.06□□□□□ -0.32
PCNX2-213ENST00000488780 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
PCNX2-213ENST00000488780 GH1P01241 217 aa13.06□□□□□ -0.32
PCNX2-213ENST00000488780 CD4P01730 458 aa13.06□□□□□ -0.32
PCNX2-213ENST00000488780 PURAQ00577 322 aaKnown RBP13.06□□□□□ -0.32
PCNX2-213ENST00000488780 EXOSC10Q01780 885 aaKnown RBP13.06□□□□□ -0.32
PCNX2-213ENST00000488780 FPGSQ05932 587 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms