RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 PRKAR2AP13861 404 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 HOXA13P31271 388 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 AP3B2Q13367 1082 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 ARHGEF16Q5VV41 709 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 XRRA1Q6P2D8 792 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 ARMCX2Q7L311 632 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 TNS4Q8IZW8 715 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 HMX1Q9NP08 348 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 PXMP2Q9NR77 195 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP1-214ENST00000488723 FRMPD4Q14CM0 1322 aa19.58■□□□□ 0.73
CDK5RAP1-214ENST00000488723 CYBAP13498 195 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CYP2C19P33261 490 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CLK2P49760 499 aaKnown RBP19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CUL4AQ13619 759 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 VTA1Q9NP79 307 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 KIF3AQ9Y496 699 aa19.58■□□□□ 0.72
CDK5RAP1-214ENST00000488723 SPDYE3A6NKU9 549 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 MSCO60682 206 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PPFIA3O75145 1194 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 STAM2O75886 525 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 STXBP2Q15833 593 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 VSIG10LQ86VR7 867 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 FCHSD1Q86WN1 690 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 DAGLBQ8NCG7 672 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 ABHD8Q96I13 439 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PURBQ96QR8 312 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PDCD2LQ9BRP1 358 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 ALG1Q9BT22 464 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 VPS54Q9P1Q0 977 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 MCM3APO60318 1980 aa19.57■□□□□ 0.72
CDK5RAP1-214ENST00000488723 K7ELQ4 463 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 JAK2O60674 1132 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 EIF3JO75822 258 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 NR3C2P08235 984 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 NLRP5P59047 1200 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PDE4DQ08499 809 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 ACVR2BQ13705 512 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 REXO1Q8N1G1 1221 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 INTS4Q96HW7 963 aaKnown RBP19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PHF20Q9BVI0 1012 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PAK6Q9NQU5 681 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PCDHA4Q9UN74 947 aa19.56■□□□□ 0.72
CDK5RAP1-214ENST00000488723 SEPT4O43236 478 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 ZNF865P0CJ78 1059 aaPredicted RBP19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CCL5P13501 91 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 TRIM32Q13049 653 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 FAM184AQ8NB25 1140 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 TMEM106CQ9BVX2 250 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 KATNBL1Q9H079 304 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PCDHA6Q9UN73 950 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PCDHA8Q9Y5H6 950 aa19.55■□□□□ 0.72
CDK5RAP1-214ENST00000488723 RBM47A0AV96 593 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 GJB1P08034 283 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 CCND2P30279 289 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 TRIM29Q14134 588 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PGM5Q15124 567 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PCNX4Q63HM2 1172 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 IQSEC1Q6DN90 963 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 SHISA4Q96DD7 197 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 AIFM3Q96NN9 605 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 RNF208Q9H0X6 261 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 FAM184BQ9ULE4 1060 aa19.54■□□□□ 0.72
CDK5RAP1-214ENST00000488723 M0R2N6 131 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 AKR1A1P14550 325 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 MTFR1Q15390 333 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 UBE2SQ16763 222 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 KCNV1Q6PIU1 500 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 HSCBQ8IWL3 235 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 BLIDQ8IZY5 108 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 TRPV1Q8NER1 839 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 UNC93B1Q9H1C4 597 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
CDK5RAP1-214ENST00000488723 SREBF1P36956 1147 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 NPY5RQ15761 445 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 PRAMEF19Q5SWL8 479 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 TAPT1Q6NXT6 567 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 FBXO18Q8NFZ0 1043 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 DDX20Q9UHI6 824 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 SMC3Q9UQE7 1217 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 Q9Y3F1 56 aa19.52■□□□□ 0.72
CDK5RAP1-214ENST00000488723 MAFGO15525 162 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CYP3A4P08684 503 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 TGFB3P10600 412 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CCND3P30281 292 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SCFD2Q8WU76 684 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ANO3Q9BYT9 981 aa19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 ZHX1Q9UKY1 873 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP1-214ENST00000488723 NKRFO15226 690 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 DUSP11O75319 330 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 SGPL1O95470 568 aa19.5■□□□□ 0.71
CDK5RAP1-214ENST00000488723 MMP1P03956 469 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms