RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 HOXC6P09630 235 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
NUP188-207ENST00000487952 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
NUP188-207ENST00000487952 NR5A1Q13285 461 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
NUP188-207ENST00000487952 NPY5RQ15761 445 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 RAET1EQ8TD07 263 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 OXER1Q8TDS5 423 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
NUP188-207ENST00000487952 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 GABRQQ9UN88 632 aa16.06■□□□□ 0.16
NUP188-207ENST00000487952 RBBP6Q7Z6E9 1792 aaKnown RBP16.05■□□□□ 0.16
NUP188-207ENST00000487952 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 ASB14A6NK59 587 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
NUP188-207ENST00000487952 PIK3AP1Q6ZUJ8 805 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 OTOP1Q7RTM1 612 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 USP6NLQ92738 828 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
NUP188-207ENST00000487952 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
NUP188-207ENST00000487952 M0R2N6 131 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 ADAMTS3O15072 1205 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
NUP188-207ENST00000487952 CCND2P30279 289 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 UBXN2AP68543 259 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 CAP1Q01518 475 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 PDE4DQ08499 809 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 IRF5Q13568 498 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
NUP188-207ENST00000487952 NOSTRINQ8IVI9 506 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 TRMT44Q8IYL2 757 aaKnown RBP16.04■□□□□ 0.16
NUP188-207ENST00000487952 MAML3Q96JK9 1138 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
NUP188-207ENST00000487952 MGAMO43451 1857 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 NR3C2P08235 984 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 MYCLP12524 364 aaPredicted RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 ZNF76P36508 570 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 SREBF1P36956 1147 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 ARHGAP4P98171 946 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 BRAPQ7Z569 592 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 CTU1Q7Z7A3 348 aaKnown RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 FERMT3Q86UX7 667 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 MSL3Q8N5Y2 521 aaKnown RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
NUP188-207ENST00000487952 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
NUP188-207ENST00000487952 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 KIF28PB7ZC32 967 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 ADCY3O60266 1144 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.163e-7■■□□□ 12.6
NUP188-207ENST00000487952 NUCB2P80303 420 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 PGM5Q15124 567 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 INF2Q27J81 1249 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 OLFML2BQ68BL8 750 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 XRRA1Q6P2D8 792 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 ARMCX2Q7L311 632 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 FGD4Q96M96 766 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
NUP188-207ENST00000487952 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
NUP188-207ENST00000487952 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
NUP188-207ENST00000487952 STXBP2Q15833 593 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 CCL14Q16627 93 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 SLAIN1Q8ND83 568 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 IL31RAQ8NI17 732 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
NUP188-207ENST00000487952 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.01■□□□□ 0.15
NUP188-207ENST00000487952 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
NUP188-207ENST00000487952 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
NUP188-207ENST00000487952 ASTN1O14525 1302 aa16■□□□□ 0.15
NUP188-207ENST00000487952 STAM2O75886 525 aa16■□□□□ 0.15
NUP188-207ENST00000487952 ATP2B1P20020 1258 aa16■□□□□ 0.15
NUP188-207ENST00000487952 EDNRBP24530 442 aa16■□□□□ 0.15
NUP188-207ENST00000487952 USP11P51784 963 aa16■□□□□ 0.15
NUP188-207ENST00000487952 RESTQ13127 1097 aa16■□□□□ 0.15
NUP188-207ENST00000487952 LETM2Q2VYF4 491 aa16■□□□□ 0.15
NUP188-207ENST00000487952 GNPTABQ3T906 1256 aa16■□□□□ 0.15
NUP188-207ENST00000487952 MAMDC4Q6UXC1 1216 aa16■□□□□ 0.15
NUP188-207ENST00000487952 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
NUP188-207ENST00000487952 PRDM10Q9NQV6 1147 aa16■□□□□ 0.15
NUP188-207ENST00000487952 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
NUP188-207ENST00000487952 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
NUP188-207ENST00000487952 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
NUP188-207ENST00000487952 CASP8AP2Q9UKL3 1982 aa15.99■□□□□ 0.15
NUP188-207ENST00000487952 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
NUP188-207ENST00000487952 EIF3JO75822 258 aaKnown RBP15.99■□□□□ 0.15
NUP188-207ENST00000487952 F13A1P00488 732 aa15.99■□□□□ 0.15
NUP188-207ENST00000487952 HMGCRP04035 888 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms