RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CFHP08603 1231 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 PARP1P09874 1014 aaKnown RBP8.36□□□□□ -1.07
UBE4B-209ENST00000487244 WTAPQ15007 396 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
UBE4B-209ENST00000487244 USH1GQ495M9 461 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 ERICH6BQ5W0A0 696 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 CASC1Q6TDU7 716 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 NSMFQ6X4W1 530 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 SLC30A10Q6XR72 485 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 RAB11FIP4Q86YS3 637 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 FAM133AQ8N9E0 248 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 RDH13Q8NBN7 331 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 PAWRQ96IZ0 340 aaKnown RBP8.36□□□□□ -1.07
UBE4B-209ENST00000487244 TCEANC2Q96MN5 208 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 TINF2Q9BSI4 451 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 SLC5A4Q9NY91 659 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 CYP39A1Q9NYL5 469 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 FBXO40Q9UH90 709 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 DDX20Q9UHI6 824 aaKnown RBP8.36□□□□□ -1.07
UBE4B-209ENST00000487244 MAD2L2Q9UI95 211 aa8.36□□□□□ -1.07
UBE4B-209ENST00000487244 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
UBE4B-209ENST00000487244 PFASO15067 1338 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-209ENST00000487244 KLRF2D3W0D1 207 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 SH2B2O14492 632 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-209ENST00000487244 ADCY6O43306 1168 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 PPP1R11O60927 126 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-209ENST00000487244 ZNF865P0CJ78 1059 aaPredicted RBP8.35□□□□□ -1.07
UBE4B-209ENST00000487244 CPA1P15085 419 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 PTGS1P23219 599 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 TROAPQ12815 778 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 GRM4Q14833 912 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 QRICH1Q2TAL8 776 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 TKFCQ3LXA3 575 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 TJAP1Q5JTD0 557 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 ARMCX2Q7L311 632 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 CCDC144CPQ8IYA2 1237 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 MTRQ99707 1265 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 JMJD4Q9H9V9 463 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 VAT1LQ9HCJ6 419 aa8.35□□□□□ -1.07
UBE4B-209ENST00000487244 RANBP2P49792 3224 aaKnown RBP8.35□□□□□ -1.07
UBE4B-209ENST00000487244 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 TRIOBPQ9H2D6 2365 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 ERICH2A1L162 156 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 OPLAHO14841 1288 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 SEPT4O43236 478 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 CYTH3O43739 400 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 RXRAP19793 462 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 MCM5P33992 734 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 BAATQ14032 418 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 SART3Q15020 963 aaKnown RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 GJC2Q5T442 439 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 MAMDC4Q6UXC1 1216 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 NUP133Q8WUM0 1156 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 TBC1D5Q92609 795 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 MTMR8Q96EF0 704 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 KATNBL1Q9H079 304 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 ZHX1Q9UKY1 873 aaPredicted RBP8.34□□□□□ -1.07
UBE4B-209ENST00000487244 PCDHB3Q9Y5E6 796 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 KIAA1217Q5T5P2 1943 aa8.34□□□□□ -1.07
UBE4B-209ENST00000487244 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 H0YGN5 161 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 PLEKHA8P1O95397 391 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 PGK1P00558 417 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 COL6A1P12109 1028 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 CALML3P27482 149 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 HSPA4P34932 840 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 COPS2P61201 443 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 RPS6P62753 249 aaKnown RBP8.33□□□□□ -1.08
UBE4B-209ENST00000487244 EXOSC10Q01780 885 aaKnown RBP8.33□□□□□ -1.08
UBE4B-209ENST00000487244 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 NFXL1Q6ZNB6 911 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 NECAB2Q7Z6G3 386 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 HOMER1Q86YM7 354 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 FBXO16Q8IX29 292 aaPredicted RBP8.33□□□□□ -1.08
UBE4B-209ENST00000487244 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
UBE4B-209ENST00000487244 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 PIBF1Q8WXW3 757 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 KCNB2Q92953 911 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 PIGSQ96S52 555 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 C11orf49Q9H6J7 331 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 COL20A1Q9P218 1284 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 CNPY2Q9Y2B0 182 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 SNX14Q9Y5W7 946 aa8.33□□□□□ -1.08
UBE4B-209ENST00000487244 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 MYADML2A6NDP7 307 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 ACTN4O43707 911 aaKnown RBP8.32□□□□□ -1.08
UBE4B-209ENST00000487244 MSCO60682 206 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 DDAH1O94760 285 aa8.32□□□□□ -1.08
UBE4B-209ENST00000487244 AKR1A1P14550 325 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms