RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SKIV2LQ15477 1246 aaKnown RBP22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 MPHOSPH6Q99547 160 aaKnown RBP22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 TANC1Q9C0D5 1861 aa22.88■■□□□ 1.25
SMPDL3A-202ENST00000487215 XIRP2A4UGR9 3374 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 ARHGEF15O94989 841 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 PTPN11Q06124 597 aaPredicted RBP22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 RETREG2Q8NC44 543 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 DNERQ8NFT8 737 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 PHOSPHO2Q8TCD6 241 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 FAM227BQ96M60 508 aa22.87■■□□□ 1.25
SMPDL3A-202ENST00000487215 A0A0D9SFI3 127 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 GTPBP6O43824 516 aaPredicted RBP22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 ARIH2O95376 493 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 SNHG28P0DPA3 235 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 TXNP10599 105 aaKnown RBP22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 KCNQ1P51787 676 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 AAK1Q2M2I8 961 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 HERC6Q8IVU3 1022 aa22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 FTOQ9C0B1 505 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMPDL3A-202ENST00000487215 HAND2P61296 217 aa22.85■■□□□ 1.25
SMPDL3A-202ENST00000487215 TAP1Q03518 808 aa22.85■■□□□ 1.25
SMPDL3A-202ENST00000487215 BFSP2Q13515 415 aa22.85■■□□□ 1.25
SMPDL3A-202ENST00000487215 MCMDC2Q4G0Z9 681 aa22.85■■□□□ 1.25
SMPDL3A-202ENST00000487215 NOD1Q9Y239 953 aa22.85■■□□□ 1.25
SMPDL3A-202ENST00000487215 ZMYM6O95789 1325 aa22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 HSPD1P10809 573 aaKnown RBP22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 ANKRD45Q5TZF3 282 aa22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 KRT40Q6A162 431 aa22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 ARNTL2Q8WYA1 636 aa22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 TTC14Q96N46 770 aa22.84■■□□□ 1.25
SMPDL3A-202ENST00000487215 TRANK1O15050 2925 aa22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 B4DLN1 442 aa22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 MRPL12P52815 198 aaKnown RBP22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 PDE1AP54750 535 aa22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 CHMP4BP1P59074 171 aa22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 USH1GQ495M9 461 aa22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 ZNF589Q86UQ0 364 aaPredicted RBP22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 ZBTB47Q9UFB7 747 aaPredicted RBP22.83■■□□□ 1.25
SMPDL3A-202ENST00000487215 TCF20Q9UGU0 1960 aaKnown RBP22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 KIF28PB7ZC32 967 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 BAIAP3O94812 1187 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 CCDC62Q6P9F0 684 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 TBC1D10CQ8IV04 446 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 RGS22Q8NE09 1264 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 CTAGE1Q96RT6 745 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 CPVLQ9H3G5 476 aa22.82■■□□□ 1.24
SMPDL3A-202ENST00000487215 BDP1A6H8Y1 2624 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 GOLGA8HP0CJ92 632 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 NMIQ13287 307 aaPredicted RBP22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 PTGISQ16647 500 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 MFSD6Q6ZSS7 791 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 SPRED2Q7Z698 418 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 AFG1LQ8WV93 481 aa22.81■■□□□ 1.24
SMPDL3A-202ENST00000487215 PRRC2BQ5JSZ5 2229 aaKnown RBP22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 MMP3P08254 477 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 PCP11498 1178 aaKnown RBP22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 GRB10Q13322 594 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 GPNMBQ14956 572 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 GPATCH4Q5T3I0 446 aaKnown RBP22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 GDF6Q6KF10 455 aaPredicted RBP22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 SESTD1Q86VW0 696 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 CCDC155Q8N6L0 562 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 CAGE1Q8TC20 777 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 AFAP1L1Q8TED9 768 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 UBA5Q9GZZ9 404 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 COG5Q9UP83 839 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 CCDC171Q6TFL3 1326 aa22.8■■□□□ 1.24
SMPDL3A-202ENST00000487215 TLL1O43897 1013 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 KCNJ6P48051 423 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 ARHGAP1Q07960 439 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 LY6KQ17RY6 165 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 SEPT14Q6ZU15 432 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 TBC1D5Q92609 795 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 KAT2BQ92831 832 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 ZKSCAN3Q9BRR0 538 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 C1QTNF1Q9BXJ1 281 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 COL20A1Q9P218 1284 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 NEDD4P46934 1319 aa22.79■■□□□ 1.24
SMPDL3A-202ENST00000487215 LCHNA4D1U4 455 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 LPXNO60711 386 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 GH1P01241 217 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 PLA2G5P39877 138 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 WDR5P61964 334 aaKnown RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 CDC37Q16543 378 aaPredicted RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 TMCO2Q7Z6W1 182 aaPredicted RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 TICAM2Q86XR7 235 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 SYTL5Q8TDW5 730 aaPredicted RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 DHX38Q92620 1227 aaKnown RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 TAAR1Q96RJ0 339 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 RNF41Q9H4P4 317 aaPredicted RBP22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 ABCB11O95342 1321 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 NCOR1O75376 2440 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 TET1Q8NFU7 2136 aa22.78■■□□□ 1.24
SMPDL3A-202ENST00000487215 COL4A4P53420 1690 aaPredicted RBP22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 PTPRSQ13332 1948 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 SELPP16109 830 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 LRRC8DQ7L1W4 858 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 CHST3Q7LGC8 479 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 DGKHQ86XP1 1220 aa22.77■■□□□ 1.24
SMPDL3A-202ENST00000487215 ESR2Q92731 530 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms