RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 STAG1Q8WVM7 1258 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 MAGEF1Q9HAY2 307 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 SMARCAL1Q9NZC9 954 aa8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 DMGDHQ9UI17 866 aaKnown RBP8.43□□□□□ -1.06
COL6A4P1-202ENST00000487147 ATP2C1P98194 919 aaPredicted RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 NT5DC1Q5TFE4 455 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 MYOCDQ8IZQ8 938 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 MGARPQ8TDB4 240 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC77Q9BR77 488 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 EHD4Q9H223 541 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 CD248Q9HCU0 757 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 SPATS2LQ9NUQ6 558 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 INTS9Q9NV88 658 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZNF652Q9Y2D9 606 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 ATP8A1Q9Y2Q0 1164 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 CCDC169A6NNP5 214 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 TBCAO75347 108 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 PALMO75781 387 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 CETN1Q12798 172 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 ALX1Q15699 326 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 NBPF9Q3BBW0 867 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 NAA35Q5VZE5 725 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 UHMK1Q8TAS1 419 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 LACRTQ9GZZ8 138 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM237AA0A1B0GTK4 181 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 ANKRD62A6NC57 917 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 PGRMC1O00264 195 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 PLCG1P19174 1290 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 TFAP4Q01664 338 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 ZNF513Q8N8E2 541 aaPredicted RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 TTLL11Q8NHH1 800 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 CALR3Q96L12 384 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 RNPC3Q96LT9 517 aaKnown RBP8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 PLVAPQ9BX97 442 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 NKIRAS1Q9NYS0 192 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 AMFRQ9UKV5 643 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 DUSP10Q9Y6W6 482 aa8.42□□□□□ -1.06
COL6A4P1-202ENST00000487147 LRRC53A6NM62 1247 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 IL2RBP14784 551 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 GFPT1Q06210 699 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 DRP2Q13474 957 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 BIRC3Q13489 604 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 CUL1Q13616 776 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 CALCRLQ16602 461 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 AP1ARQ63HQ0 302 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 ADAT2Q7Z6V5 191 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 TBC1D1Q86TI0 1168 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 ADSSL1Q8N142 457 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 HSD3B7Q9H2F3 369 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 CNOT10Q9H9A5 744 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 HOMER3Q9NSC5 361 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 ADAMTS1Q9UHI8 967 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 MTUS1Q9ULD2 1270 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 TMEM131LA2VDJ0 1609 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 SRGNP10124 158 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 CARSP49589 748 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 RCAN1P53805 252 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM133BQ5BKY9 247 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 RNF10Q8N5U6 811 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 AP1M1Q9BXS5 423 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 RBM12Q9NTZ6 932 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 HIP1RO75146 1068 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 H2AFZP0C0S5 128 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 ATP5DP30049 168 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 GBP1P32455 592 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 CETN2P41208 172 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 EZH2Q15910 746 aaKnown RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 NTRK3Q16288 839 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 H2AFVQ71UI9 128 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 EGFL6Q8IUX8 553 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 MS4A14Q96JA4 679 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 PCDHA4Q9UN74 947 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 DIP2CQ9Y2E4 1556 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 MAP3K15Q6ZN16 1313 aa8.41□□□□□ -1.06
COL6A4P1-202ENST00000487147 BACH1O14867 736 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 ECM2O94769 699 aaPredicted RBP8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 GNA14O95837 355 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 FAM107AO95990 144 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 LDHCP07864 332 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 MAGOHP61326 146 aaKnown RBP8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 PPP2R2AP63151 447 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 HDLBPQ00341 1268 aaKnown RBP8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 SEMA3FQ13275 785 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 NBPF20Q3BBV1 942 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 TRIM68Q6AZZ1 485 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 MAGOHBQ96A72 148 aaKnown RBP8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 AK8Q96MA6 479 aa8.4□□□□□ -1.06
COL6A4P1-202ENST00000487147 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms