RNA–Protein interactions for RNA: ENST00000486943.1

CACNA1F-206, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 3

Gene CACNA1F, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-206ENST00000486943 KIF5BP33176 963 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 LIFRP42702 1097 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 CPT1AP50416 773 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 TMEM63BQ5T3F8 832 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 FAM126BQ8IXS8 530 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 LRCH3Q96II8 777 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 TAAR1Q96RJ0 339 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 RMDN3Q96TC7 470 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 PCDHA1Q9Y5I3 950 aa16.69■□□□□ 0.26
CACNA1F-206ENST00000486943 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 OPLAHO14841 1288 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 CYTH3O43739 400 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 CFBP00751 764 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 PIGSQ96S52 555 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 LZTS2Q9BRK4 669 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
CACNA1F-206ENST00000486943 CD4P01730 458 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 PTGS1P23219 599 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 ITGB8P26012 769 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 STXBP2Q15833 593 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 SZT2Q5T011 3432 aa16.67■□□□□ 0.26
CACNA1F-206ENST00000486943 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 CCDC69A6NI79 296 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 A6NJR5 290 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 KPNA6O60684 536 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 TIMP1P01033 207 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 CALM1P0DP23 149 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 CALM2P0DP24 149 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 CALM3P0DP25 149 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 TXNP10599 105 aaKnown RBP16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 GNAQP50148 359 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 FPGSQ05932 587 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 CCDC62Q6P9F0 684 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
CACNA1F-206ENST00000486943 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 NR3C2P08235 984 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 SHHQ15465 462 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 MFSD5Q6N075 450 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 MTG1Q9BT17 334 aaPredicted RBP16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 GPHNQ9NQX3 736 aaPredicted RBP16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 GRIN2DO15399 1336 aa16.65■□□□□ 0.26
CACNA1F-206ENST00000486943 GCOM1H8Y6P7 765 aaPredicted RBP16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 ARIH2O95376 493 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 NEFLP07196 543 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 KRT32Q14532 448 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 RRP36Q96EU6 259 aaKnown RBP16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 NEK1Q96PY6 1258 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 PDCD2LQ9BRP1 358 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 MYL10Q9BUA6 226 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
CACNA1F-206ENST00000486943 GH1P01241 217 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 MYL3P08590 195 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 PSMC6P62333 389 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 PPIGQ13427 754 aaKnown RBP eCLIP16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 PGM5Q15124 567 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 COPS5Q92905 334 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 EMID1Q96A84 441 aaPredicted RBP16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 FRMPD4Q14CM0 1322 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
CACNA1F-206ENST00000486943 ARHGAP1Q07960 439 aa16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 FAM109BQ6ICB4 259 aaPredicted RBP16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 KCNV1Q6PIU1 500 aa16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 TMEM199Q8N511 208 aa16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
CACNA1F-206ENST00000486943 B4GALT4O60513 344 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 PLEKHA8P1O95397 391 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 CCND2P30279 289 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 EPHB4P54760 987 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 LY6KQ17RY6 165 aa16.61■□□□□ 0.25
CACNA1F-206ENST00000486943 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms