RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 FAM173BQ6P4H8 233 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 CCAR1Q8IX12 1150 aaKnown RBP10.93□□□□□ -0.66
MCF2L-227ENST00000486806 DNERQ8NFT8 737 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 IL31RAQ8NI17 732 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 SOCS4Q8WXH5 440 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 USP6NLQ92738 828 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 TAAR1Q96RJ0 339 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 IVNS1ABPQ9Y6Y0 642 aa10.93□□□□□ -0.66
MCF2L-227ENST00000486806 LOC102724159A0A0B4J2E5 919 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
MCF2L-227ENST00000486806 COBLO75128 1261 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 CYP3A4P08684 503 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 HOXC6P09630 235 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 ALDH5A1P51649 535 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-227ENST00000486806 FCGRTP55899 365 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 ARHGAP4P98171 946 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 PGM5Q15124 567 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 PWP2Q15269 919 aaKnown RBP10.92□□□□□ -0.66
MCF2L-227ENST00000486806 ZNF792Q3KQV3 632 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 RILPL1Q5EBL4 403 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 NEK8Q86SG6 692 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 NSUN6Q8TEA1 469 aaKnown RBP10.92□□□□□ -0.66
MCF2L-227ENST00000486806 TNPO1Q92973 898 aaKnown RBP10.92□□□□□ -0.66
MCF2L-227ENST00000486806 RMDN3Q96TC7 470 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 ATP6V1DQ9Y5K8 247 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 PLXNB2O15031 1838 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 LRRC37A2A6NM11 1700 aa10.92□□□□□ -0.66
MCF2L-227ENST00000486806 ZSWIM8A7E2V4 1837 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 CYP3A7-CYP3A51PA0A087WV96 503 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 IGHA2P01877 340 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 EIF2AK2P19525 551 aaKnown RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 CYP3A7P24462 503 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 CIITAP33076 1130 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 PSMC4P43686 418 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 USP11P51784 963 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 MAP2K5Q13163 448 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 NBR1Q14596 966 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 TTC38Q5R3I4 469 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 PCNX4Q63HM2 1172 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 MOXD1Q6UVY6 613 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 ZNF467Q7Z7K2 595 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 ZNF296Q8WUU4 475 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 MBOAT7Q96N66 472 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
MCF2L-227ENST00000486806 FTOQ9C0B1 505 aaKnown RBP eCLIP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 ADD3Q9UEY8 706 aaKnown RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 NOL7Q9UMY1 257 aaKnown RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
MCF2L-227ENST00000486806 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 FAM86B1E9PN63 330 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 FKTNO75072 461 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 TDP2O95551 362 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 FAM86B2P0C5J1 330 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 GCFC2P16383 781 aaKnown RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 NASPP49321 788 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 UBXN2AP68543 259 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 MRPS9P82933 396 aaKnown RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 DNM1Q05193 864 aaKnown RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 ORC2Q13416 577 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 ARHGEF16Q5VV41 709 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 PPP4R3AQ6IN85 833 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 MAMDC4Q6UXC1 1216 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 CLEC17AQ6ZS10 378 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 CD99L2Q8TCZ2 262 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 LENG9Q96B70 501 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 MAML3Q96JK9 1138 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 USP28Q96RU2 1077 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 IWS1Q96ST2 819 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 APBA2Q99767 749 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 NUDT12Q9BQG2 462 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 POLR3EQ9NVU0 708 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 PCDHB6Q9Y5E3 794 aa10.9□□□□□ -0.66
MCF2L-227ENST00000486806 MORC2Q9Y6X9 1032 aaPredicted RBP10.9□□□□□ -0.66
MCF2L-227ENST00000486806 SLC37A4O43826 429 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 STAM2O75886 525 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
MCF2L-227ENST00000486806 NR3C2P08235 984 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 ITGB5P18084 799 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 CCND2P30279 289 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 RGS2P41220 211 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 PRKCZQ05513 592 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 KIF22Q14807 665 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 PTPAQ15257 358 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 Q4G0T1 1027 aa10.89□□□□□ -0.67
MCF2L-227ENST00000486806 VSIG10LQ86VR7 867 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms