RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SENP6Q9GZR1 1112 aaPredicted RBP21■□□□□ 0.95
COL1A1-207ENST00000486572 UPF3AQ9H1J1 476 aaKnown RBP21■□□□□ 0.95
COL1A1-207ENST00000486572 SPC25Q9HBM1 224 aa21■□□□□ 0.95
COL1A1-207ENST00000486572 PXMP2Q9NR77 195 aa21■□□□□ 0.95
COL1A1-207ENST00000486572 PDRG1Q9NUG6 133 aa21■□□□□ 0.95
COL1A1-207ENST00000486572 SMPD1P17405 629 aa20.99■□□□□ 0.95
COL1A1-207ENST00000486572 ADD1P35611 737 aaKnown RBP20.99■□□□□ 0.95
COL1A1-207ENST00000486572 GJA9P57773 515 aa20.99■□□□□ 0.95
COL1A1-207ENST00000486572 HEATR3Q7Z4Q2 680 aa20.99■□□□□ 0.95
COL1A1-207ENST00000486572 IL17RAQ96F46 866 aa20.99■□□□□ 0.95
COL1A1-207ENST00000486572 GNEQ9Y223 722 aaKnown RBP20.99■□□□□ 0.95
COL1A1-207ENST00000486572 RBM47A0AV96 593 aaKnown RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 EVI5O60447 810 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 C6orf222P0C671 652 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 CST5P28325 142 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 PDIA3P30101 505 aaKnown RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 STXBP2Q15833 593 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 PRPF38BQ5VTL8 546 aaKnown RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 TLK2Q86UE8 772 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 FCHSD1Q86WN1 690 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 KLHDC9Q8NEP7 349 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 SCFD2Q8WU76 684 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 GPKOWQ92917 476 aaPredicted RBP eCLIP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 CUL5Q93034 780 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 WDR11Q9BZH6 1224 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 PHF24Q9UPV7 400 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 V9GY48 417 aaPredicted RBP20.98■□□□□ 0.95
COL1A1-207ENST00000486572 ALPK3Q96L96 1907 aa20.98■□□□□ 0.95
COL1A1-207ENST00000486572 MYADML2A6NDP7 307 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 hCG_1984214I3L0E3 225 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 PIK3CDO00329 1044 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 NR3C2P08235 984 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 DUSP28Q4G0W2 176 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 WWC2Q6AWC2 1192 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 ZNF713Q8N859 430 aaPredicted RBP20.97■□□□□ 0.95
COL1A1-207ENST00000486572 SMARCC2Q8TAQ2 1214 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 PDCD2LQ9BRP1 358 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 TSEN34Q9BSV6 310 aaKnown RBP20.97■□□□□ 0.95
COL1A1-207ENST00000486572 Q9Y3F1 56 aa20.97■□□□□ 0.95
COL1A1-207ENST00000486572 NKX3-2P78367 333 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 CCSAPQ6IQ19 270 aaPredicted RBP20.96■□□□□ 0.95
COL1A1-207ENST00000486572 PPP1R18Q6NYC8 613 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 PCSK9Q8NBP7 692 aaKnown RBP20.96■□□□□ 0.95
COL1A1-207ENST00000486572 FERMT2Q96AC1 680 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 ZNF274Q96GC6 653 aaPredicted RBP20.96■□□□□ 0.95
COL1A1-207ENST00000486572 AP5M1Q9H0R1 490 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 PSTPIP2Q9H939 334 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 NR2E3Q9Y5X4 410 aa20.96■□□□□ 0.95
COL1A1-207ENST00000486572 MOXD2PA6NHM9 499 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 MEIS2O14770 477 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 EIF3JO75822 258 aaKnown RBP20.95■□□□□ 0.94
COL1A1-207ENST00000486572 ACLYP53396 1101 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 NAPAP54920 295 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 CCT2P78371 535 aaKnown RBP20.95■□□□□ 0.94
COL1A1-207ENST00000486572 IRX5P78411 483 aaPredicted RBP20.95■□□□□ 0.94
COL1A1-207ENST00000486572 PGM5Q15124 567 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 KCNA10Q16322 511 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 LRRC26Q2I0M4 334 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 TMEM63BQ5T3F8 832 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 USP17L6PQ6QN14 398 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 NCOA5Q9HCD5 579 aaKnown RBP20.95■□□□□ 0.94
COL1A1-207ENST00000486572 RBM27Q9P2N5 1060 aaKnown RBP20.95■□□□□ 0.94
COL1A1-207ENST00000486572 FRMPD4Q14CM0 1322 aa20.95■□□□□ 0.94
COL1A1-207ENST00000486572 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 NKRFO15226 690 aaKnown RBP eCLIP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 CTAGE5O15320 804 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 DYNC1LI2O43237 492 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 PTGS1P23219 599 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 ATN1P54259 1190 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 PFKFB3Q16875 520 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 GNASQ5JWF2 1037 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 SEPT14Q6ZU15 432 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 C7orf61Q8IZ16 206 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 IL31RAQ8NI17 732 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 LARP6Q9BRS8 491 aaKnown RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 ALDH8A1Q9H2A2 487 aaPredicted RBP20.94■□□□□ 0.94
COL1A1-207ENST00000486572 BARHL2Q9NY43 387 aa20.94■□□□□ 0.94
COL1A1-207ENST00000486572 STXBP3O00186 592 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
COL1A1-207ENST00000486572 MYCLP12524 364 aaPredicted RBP20.93■□□□□ 0.94
COL1A1-207ENST00000486572 IFNAR1P17181 557 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 CCND2P30279 289 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 BEX3Q00994 111 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 ANKRD1Q15327 319 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 NTRK3Q16288 839 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 FSCN1Q16658 493 aaKnown RBP20.93■□□□□ 0.94
COL1A1-207ENST00000486572 TYW1BQ6NUM6 668 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 SLC39A5Q6ZMH5 540 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 VSIG10LQ86VR7 867 aa20.93■□□□□ 0.94
COL1A1-207ENST00000486572 H0YGN5 161 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 PRPF3O43395 683 aaKnown RBP20.92■□□□□ 0.94
COL1A1-207ENST00000486572 ARIH2O95376 493 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 ASGR1P07306 291 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 SCG2P13521 617 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 AKAP17AQ02040 695 aaKnown RBP20.92■□□□□ 0.94
COL1A1-207ENST00000486572 SNX17Q15036 470 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 TEX2Q8IWB9 1127 aa20.92■□□□□ 0.94
COL1A1-207ENST00000486572 PHKBQ93100 1093 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms