RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 USP17L21D6R901 530 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 MBTPS2O43462 519 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
SND1-213ENST00000486037 KRT37O76014 449 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 SMAD2Q15796 467 aaKnown RBP11.7□□□□□ -0.54
SND1-213ENST00000486037 DUSP28Q4G0W2 176 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 MUM1L1Q5H9M0 696 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 CNKSR3Q6P9H4 555 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 COPS5Q92905 334 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 UPF3BQ9BZI7 483 aaKnown RBP11.7□□□□□ -0.54
SND1-213ENST00000486037 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 ACAD9Q9H845 621 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
SND1-213ENST00000486037 MBD4O95243 580 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 CXCL10P02778 98 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 SNAP25P60880 206 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 BFSP2Q13515 415 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 EPC2Q52LR7 807 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 SSH3Q8TE77 659 aa11.69□□□□□ -0.54
SND1-213ENST00000486037 ATOH1Q92858 354 aaPredicted RBP11.69□□□□□ -0.54
SND1-213ENST00000486037 CTDP1Q9Y5B0 961 aaPredicted RBP11.69□□□□□ -0.54
SND1-213ENST00000486037 H0Y858 1186 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 HMMRO75330 724 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 RASA1P20936 1047 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.543e-6■■■■■ 43.7
SND1-213ENST00000486037 OAZ1P54368 228 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 MBTPS1Q14703 1052 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
SND1-213ENST00000486037 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 TRAF7Q6Q0C0 670 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 LRRC8DQ7L1W4 858 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 FBXL6Q8N531 539 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
SND1-213ENST00000486037 MORC4Q8TE76 937 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 WNT8BQ93098 351 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 CHMP4CQ96CF2 233 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 WDR11Q9BZH6 1224 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
SND1-213ENST00000486037 VTA1Q9NP79 307 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 CYP39A1Q9NYL5 469 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 WDR87Q6ZQQ6 2873 aa11.68□□□□□ -0.54
SND1-213ENST00000486037 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 H3BNC9 293 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 LINC01565O15544 149 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 TBX10O75333 385 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 SELPP16109 830 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 PDE4AP27815 886 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 ZXDAP98168 799 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 NUCB1Q02818 461 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 HYAL1Q12794 435 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 GPM6BQ13491 265 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 PTGISQ16647 500 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 LRRFIP1Q32MZ4 808 aaKnown RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 TMED8Q6PL24 325 aaPredicted RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 ERMP1Q7Z2K6 904 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 SUGP1Q8IWZ8 645 aaKnown RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 LRRC47Q8N1G4 583 aaKnown RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 AFAP1L1Q8TED9 768 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 TRERF1Q96PN7 1200 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 PRRX2Q99811 253 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 ATP8A2Q9NTI2 1148 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 NOD1Q9Y239 953 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
SND1-213ENST00000486037 MICAL3Q7RTP6 2002 aa11.67□□□□□ -0.54
SND1-213ENST00000486037 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
SND1-213ENST00000486037 MED19A0JLT2 244 aaPredicted RBP11.66□□□□□ -0.54
SND1-213ENST00000486037 PRR23AA6NEV1 266 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 PROB1E7EW31 1015 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 STXBP3O00186 592 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 GOLIM4O00461 696 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 LGR5O75473 907 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 CKBP12277 381 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 ALAS1P13196 640 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 CPT1AP50416 773 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 PTPROQ16827 1216 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 CAGE1Q8TC20 777 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
SND1-213ENST00000486037 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 INSL6Q9Y581 213 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 CFAP47Q6ZTR5 3102 aa11.66□□□□□ -0.54
SND1-213ENST00000486037 NLRC5Q86WI3 1866 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms