RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 FAM47CQ5HY64 1035 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 RPUSD2Q8IZ73 545 aaKnown RBP23.81■■□□□ 1.4
CHRD-215ENST00000485883 PNMA1Q8ND90 353 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 SCFD2Q8WU76 684 aa23.81■■□□□ 1.4
CHRD-215ENST00000485883 A6NJR5 290 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 SUPT20HL2P0C7V6 817 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 TXNP10599 105 aaKnown RBP23.8■■□□□ 1.4
CHRD-215ENST00000485883 TTLL4Q14679 1199 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 DEFB128Q7Z7B8 93 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 COL20A1Q9P218 1284 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 SLC4A7Q9Y6M7 1214 aa23.8■■□□□ 1.4
CHRD-215ENST00000485883 ZBBXA8MT70 800 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 NKRFO15226 690 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHRD-215ENST00000485883 IQCA1Q86XH1 822 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 ADGRF4Q8IZF3 695 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 RGS22Q8NE09 1264 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 ANKS1AQ92625 1134 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 TAAR1Q96RJ0 339 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 MPHOSPH6Q99547 160 aaKnown RBP23.79■■□□□ 1.4
CHRD-215ENST00000485883 SLC28A3Q9HAS3 691 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 ZSWIM5Q9P217 1185 aa23.79■■□□□ 1.4
CHRD-215ENST00000485883 SCN10AQ9Y5Y9 1956 aa23.78■■□□□ 1.4
CHRD-215ENST00000485883 IGFBP4P22692 258 aa23.78■■□□□ 1.4
CHRD-215ENST00000485883 IRX6P78412 446 aaPredicted RBP23.78■■□□□ 1.4
CHRD-215ENST00000485883 CCDC85BQ15834 202 aaPredicted RBP23.78■■□□□ 1.4
CHRD-215ENST00000485883 ENAHQ8N8S7 591 aaPredicted RBP23.78■■□□□ 1.4
CHRD-215ENST00000485883 SYTL5Q8TDW5 730 aaPredicted RBP23.78■■□□□ 1.4
CHRD-215ENST00000485883 ZSCAN10Q96SZ4 725 aaPredicted RBP23.78■■□□□ 1.4
CHRD-215ENST00000485883 KAT14Q9H8E8 782 aa23.78■■□□□ 1.4
CHRD-215ENST00000485883 GBF1Q92538 1859 aa23.78■■□□□ 1.4
CHRD-215ENST00000485883 QRICH1Q2TAL8 776 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 BRDTQ58F21 947 aaPredicted RBP23.77■■□□□ 1.4
CHRD-215ENST00000485883 NFRKBQ6P4R8 1299 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 CCDC62Q6P9F0 684 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 SEPT14Q6ZU15 432 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 IL25Q9H293 177 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 VAT1LQ9HCJ6 419 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 RAD50Q92878 1312 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 MUC3AQ02505 3323 aa23.77■■□□□ 1.4
CHRD-215ENST00000485883 ATP2A2P16615 1042 aaKnown RBP23.76■■□□□ 1.39
CHRD-215ENST00000485883 CHMP4BP1P59074 171 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 LY6KQ17RY6 165 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 TJAP1Q5JTD0 557 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 AFG1LQ8WV93 481 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 SYMPKQ92797 1274 aaKnown RBP23.76■■□□□ 1.39
CHRD-215ENST00000485883 DSCC1Q9BVC3 393 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 ABCB11O95342 1321 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 SCN5AQ14524 2016 aa23.76■■□□□ 1.39
CHRD-215ENST00000485883 B4DLN1 442 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 KPNA6O60684 536 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 MRPL12P52815 198 aaKnown RBP23.75■■□□□ 1.39
CHRD-215ENST00000485883 ASPRV1Q53RT3 343 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 CCDC178Q5BJE1 867 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 JMJD4Q9H9V9 463 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 PCDHA11Q9Y5I1 949 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 TTC28Q96AY4 2481 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 LAMA4Q16363 1823 aa23.75■■□□□ 1.39
CHRD-215ENST00000485883 RBAK-RBAKDNI3L0D1 243 aa23.74■■□□□ 1.39
CHRD-215ENST00000485883 PFKMP08237 780 aa23.74■■□□□ 1.39
CHRD-215ENST00000485883 IQCF3P0C7M6 154 aa23.74■■□□□ 1.39
CHRD-215ENST00000485883 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
CHRD-215ENST00000485883 PPP2R2DQ66LE6 453 aa23.74■■□□□ 1.39
CHRD-215ENST00000485883 STAG2Q8N3U4 1231 aa23.74■■□□□ 1.39
CHRD-215ENST00000485883 DHX16O60231 1041 aaKnown RBP23.73■■□□□ 1.39
CHRD-215ENST00000485883 MMP3P08254 477 aa23.73■■□□□ 1.39
CHRD-215ENST00000485883 PARP1P09874 1014 aaKnown RBP23.73■■□□□ 1.39
CHRD-215ENST00000485883 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
CHRD-215ENST00000485883 CHST3Q7LGC8 479 aa23.73■■□□□ 1.39
CHRD-215ENST00000485883 NSUN6Q8TEA1 469 aaKnown RBP23.73■■□□□ 1.39
CHRD-215ENST00000485883 RMDN3Q96TC7 470 aa23.73■■□□□ 1.39
CHRD-215ENST00000485883 HIP1O00291 1037 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 NT5C2P49902 561 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 PTPN11Q06124 597 aaPredicted RBP23.72■■□□□ 1.39
CHRD-215ENST00000485883 FBXO11Q86XK2 927 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 MCF2L2Q86YR7 1114 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 RETREG2Q8NC44 543 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 KAT2BQ92831 832 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 CTAGE1Q96RT6 745 aa23.72■■□□□ 1.39
CHRD-215ENST00000485883 PITPNM1O00562 1244 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 OPLAHO14841 1288 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 GH1P01241 217 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 EIF2AK2P19525 551 aaKnown RBP23.71■■□□□ 1.39
CHRD-215ENST00000485883 STXBP2Q15833 593 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 GDF6Q6KF10 455 aaPredicted RBP23.71■■□□□ 1.39
CHRD-215ENST00000485883 KRT23Q9C075 422 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 THEGQ9P2T0 379 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 NOD1Q9Y239 953 aa23.71■■□□□ 1.39
CHRD-215ENST00000485883 MRPL11Q9Y3B7 192 aaKnown RBP23.71■■□□□ 1.39
CHRD-215ENST00000485883 RFXAPO00287 272 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 CA3P07451 260 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 PTGISQ16647 500 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 TMEM67Q5HYA8 995 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 ARHGEF16Q5VV41 709 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 CYB5R4Q7L1T6 521 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 ATXN2LQ8WWM7 1075 aaKnown RBP23.7■■□□□ 1.38
CHRD-215ENST00000485883 IWS1Q96ST2 819 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 UBAC1Q9BSL1 405 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 FTOQ9C0B1 505 aaKnown RBP eCLIP23.7■■□□□ 1.38
CHRD-215ENST00000485883 MAF1Q9H063 256 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms