RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
SCAF4-206ENST00000485790 NOC4LQ9BVI4 516 aaKnown RBP16.05■□□□□ 0.16
SCAF4-206ENST00000485790 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
SCAF4-206ENST00000485790 PARP14Q460N5 1801 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 FRMPD3Q5JV73 1810 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 PFKMP08237 780 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
SCAF4-206ENST00000485790 ARHGEF16Q5VV41 709 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 RMDN3Q96TC7 470 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 GAS2L1Q99501 681 aaPredicted RBP16.04■□□□□ 0.16
SCAF4-206ENST00000485790 SLC28A3Q9HAS3 691 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
SCAF4-206ENST00000485790 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
SCAF4-206ENST00000485790 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
SCAF4-206ENST00000485790 TNKSO95271 1327 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 ERICH2A1L162 156 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 EIF3JO75822 258 aaKnown RBP16.03■□□□□ 0.16
SCAF4-206ENST00000485790 ACTN1P12814 892 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 SEPT14Q6ZU15 432 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 OTOP2Q7RTS6 562 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
SCAF4-206ENST00000485790 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 AMNQ9BXJ7 453 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 PBX4Q9BYU1 374 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 CPVLQ9H3G5 476 aa16.03■□□□□ 0.16
SCAF4-206ENST00000485790 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
SCAF4-206ENST00000485790 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 GH1P01241 217 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
SCAF4-206ENST00000485790 PTGS1P23219 599 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 RFC2P35250 354 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 BFSP2Q13515 415 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.16
SCAF4-206ENST00000485790 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 TBC1D5Q92609 795 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.16
SCAF4-206ENST00000485790 JMJD4Q9H9V9 463 aa16.02■□□□□ 0.16
SCAF4-206ENST00000485790 TRMT13Q9NUP7 481 aaKnown RBP16.02■□□□□ 0.16
SCAF4-206ENST00000485790 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
SCAF4-206ENST00000485790 ZBBXA8MT70 800 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 CFBP00751 764 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 CYP2C9P11712 490 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
SCAF4-206ENST00000485790 PBX2P40425 430 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 LAMC2Q13753 1193 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 DGKDQ16760 1214 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 TTC22Q5TAA0 569 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 CCDC62Q6P9F0 684 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 RALYLQ86SE5 291 aaKnown RBP16■□□□□ 0.15
SCAF4-206ENST00000485790 COPS5Q92905 334 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 COL25A1Q9BXS0 654 aaPredicted RBP16■□□□□ 0.15
SCAF4-206ENST00000485790 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
SCAF4-206ENST00000485790 CXXC1Q9P0U4 656 aaPredicted RBP16■□□□□ 0.15
SCAF4-206ENST00000485790 PCDHA1Q9Y5I3 950 aa16■□□□□ 0.15
SCAF4-206ENST00000485790 UMODL1Q5DID0 1318 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 IFIT3O14879 490 aaKnown RBP15.99■□□□□ 0.15
SCAF4-206ENST00000485790 ZBTB5O15062 677 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 NR3C2P08235 984 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 ATP2A2P16615 1042 aaKnown RBP15.99■□□□□ 0.15
SCAF4-206ENST00000485790 LY6KQ17RY6 165 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 CHST3Q7LGC8 479 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 DHX37Q8IY37 1157 aaKnown RBP15.99■□□□□ 0.15
SCAF4-206ENST00000485790 AFG1LQ8WV93 481 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 SCLYQ96I15 445 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 WNT8AQ9H1J5 351 aa15.99■□□□□ 0.15
SCAF4-206ENST00000485790 KIF28PB7ZC32 967 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 PTGISQ16647 500 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 DEFB128Q7Z7B8 93 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 NCOA7Q8NI08 942 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
SCAF4-206ENST00000485790 DDX41Q9UJV9 622 aaKnown RBP15.98■□□□□ 0.15
SCAF4-206ENST00000485790 PCDHA11Q9Y5I1 949 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 MRVI1Q9Y6F6 885 aa15.98■□□□□ 0.15
SCAF4-206ENST00000485790 PALM3A6NDB9 673 aaPredicted RBP15.97■□□□□ 0.15
SCAF4-206ENST00000485790 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
SCAF4-206ENST00000485790 PPFIA4O75335 1185 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 PARNO95453 639 aaKnown RBP15.97■□□□□ 0.15
SCAF4-206ENST00000485790 IQCF3P0C7M6 154 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 POLR2MP0CAP2 368 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 EIF2AK2P19525 551 aaKnown RBP15.97■□□□□ 0.15
SCAF4-206ENST00000485790 IGFBP4P22692 258 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 CHMLP26374 656 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 SEC23AQ15436 765 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 CATIPQ7Z7H3 387 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 STAG2Q8N3U4 1231 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 KATNAL1Q9BW62 490 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 NKX2-4Q9H2Z4 354 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 PRDM12Q9H4Q4 367 aa15.97■□□□□ 0.15
SCAF4-206ENST00000485790 PXMP2Q9NR77 195 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms