RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TNFAIP2Q03169 654 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 SNX17Q15036 470 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 KCNA10Q16322 511 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 USH1GQ495M9 461 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 KLHDC9Q8NEP7 349 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 TSEN34Q9BSV6 310 aaKnown RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 VAT1LQ9HCJ6 419 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 MYH6P13533 1939 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
DDX56-212ENST00000485367 TLE2Q04725 743 aa12.34□□□□□ -0.43
DDX56-212ENST00000485367 SEC23AQ15436 765 aa12.34□□□□□ -0.43
DDX56-212ENST00000485367 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
DDX56-212ENST00000485367 SLC30A10Q6XR72 485 aa12.34□□□□□ -0.43
DDX56-212ENST00000485367 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
DDX56-212ENST00000485367 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
DDX56-212ENST00000485367 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
DDX56-212ENST00000485367 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 E7EWF7 191 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 ALDH5A1P51649 535 aaPredicted RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 GJA9P57773 515 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
DDX56-212ENST00000485367 GNASQ5JWF2 1037 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 C1orf53Q5VUE5 145 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 NCOA7Q8NI08 942 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 UPF3AQ9H1J1 476 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 RBM8AQ9Y5S9 174 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 ERICH2A1L162 156 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 PQBP1O60828 265 aaKnown RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 CST5P28325 142 aaPredicted RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 CCSAPQ6IQ19 270 aaPredicted RBP12.33□□□□□ -0.44
DDX56-212ENST00000485367 STOX1Q6ZVD7 989 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 JMJD4Q9H9V9 463 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 VTA1Q9NP79 307 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
DDX56-212ENST00000485367 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
DDX56-212ENST00000485367 ASGR1P07306 291 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 ZSCAN20P17040 1043 aaPredicted RBP12.32□□□□□ -0.44
DDX56-212ENST00000485367 SMPD1P17405 629 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 PTGS1P23219 599 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 NEK4P51957 841 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 RPS6P62753 249 aaKnown RBP12.32□□□□□ -0.44
DDX56-212ENST00000485367 BEX3Q00994 111 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 TAPT1Q6NXT6 567 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 TDHQ8IZJ6 230 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 PDLIM7Q9NR12 457 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 ABCB11O95342 1321 aa12.32□□□□□ -0.44
DDX56-212ENST00000485367 TRIM43BA6NCK2 446 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 KLRF2D3W0D1 207 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 DYNC1LI2O43237 492 aaPredicted RBP12.31□□□□□ -0.44
DDX56-212ENST00000485367 CLTBP09497 229 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 PDE4DQ08499 809 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 WTAPQ15007 396 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 SART3Q15020 963 aaKnown RBP12.31□□□□□ -0.44
DDX56-212ENST00000485367 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 TMEM63BQ5T3F8 832 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 TLK2Q86UE8 772 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 FBXO11Q86XK2 927 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 RNF214Q8ND24 703 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 TRIM43Q96BQ3 446 aaPredicted RBP12.31□□□□□ -0.44
DDX56-212ENST00000485367 MPHOSPH6Q99547 160 aaKnown RBP12.31□□□□□ -0.44
DDX56-212ENST00000485367 ESYT1Q9BSJ8 1104 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 GNEQ9Y223 722 aaKnown RBP12.31□□□□□ -0.44
DDX56-212ENST00000485367 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
DDX56-212ENST00000485367 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 CTAGE5O15320 804 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
DDX56-212ENST00000485367 FSCN1Q16658 493 aaKnown RBP12.3□□□□□ -0.44
DDX56-212ENST00000485367 RGS22Q8NE09 1264 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 BADQ92934 168 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
DDX56-212ENST00000485367 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 BAZ2BQ9UIF8 2168 aaKnown RBP12.3□□□□□ -0.44
DDX56-212ENST00000485367 ELP1O95163 1332 aa12.3□□□□□ -0.44
DDX56-212ENST00000485367 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms